Related Experiment Video
Updated: Jul 13, 2025

08:45
Characterizing RNA Modifications in Single Neurons Using Mass Spectrometry
Published on: April 21, 2022
2.4K
N6-Methyladenosine mRNA Modification: From Modification Site Selectivity to Neurological Functions
Zeyu Zhang1, Xiu-Jie Wang1,2
1Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing 100101, China.
Accounts of Chemical Research
|October 17, 2023
Summary
MicroRNAs guide the m6A methyltransferase to mRNAs, impacting brain development and memory. This study reveals m6A
Area of Science:
- Molecular Biology
- Neuroscience
- Epigenetics
Background:
- N6-methyladenosine (m6A) is the most abundant internal modification on eukaryotic mRNAs, dynamically regulating gene expression.
- m6A plays crucial roles in various biological processes, including embryonic development, organ function, and pathogenesis.
- The precise mechanisms and physiological roles of m6A, particularly in the brain, are still being elucidated.
Purpose of the Study:
- To investigate the site selectivity mechanisms of m6A formation, focusing on the role of microRNAs (miRNAs).
- To explore the physiological functions of m6A modification in cerebellum development and long-term memory consolidation.
- To establish a model for studying memory formation efficacy.
Main Methods:
- Profiling m6A modification in mouse and human cells.
- Manipulating miRNA biogenesis enzymes (Dicer) and individual miRNAs.
- Generating hippocampus-specific postnatal m6A methyltransferase (Mettl3) knockout mice.
Main Results:
- Nucleus-localized miRNAs guide the m6A methyltransferase METTL3 to target mRNAs, influencing m6A site selection.
- Mettl3 knockout in developing mouse cerebellum caused severe defects, including aberrant mRNA splicing and increased apoptosis.
- Mettl3 knockout in the postnatal hippocampus impaired long-term memory consolidation by reducing translation of memory-related genes.
Conclusions:
- miRNAs play a critical role in regulating m6A formation on mRNAs.
- m6A modification is essential for cerebellum development and long-term memory consolidation.
- The developed hippocampus-specific m6A knockout model provides a valuable tool for memory research.
Related Concept Videos
RNA Editing
9.0K
RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
9.0K
Pre-mRNA Processing: Modification of pre-mRNA Ends
9.4K
In eukaryotic cells, transcripts made by RNA polymerase are modified and processed before exiting the nucleus. Unprocessed RNA is called precursor mRNA or pre-mRNA to distinguish it from mature mRNA.
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a cap to the 5' end of the growing transcript. In this process, a 5' phosphate is replaced by modified guanosine that has a methyl group attached (7-methyl guanosine). This 5' cap helps...
Once about 20-40 ribonucleotides have been joined together by RNA polymerase, a group of enzymes adds a cap to the 5' end of the growing transcript. In this process, a 5' phosphate is replaced by modified guanosine that has a methyl group attached (7-methyl guanosine). This 5' cap helps...
9.4K
Nuclear Export of mRNA
7.7K
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
7.7K
Chromatin Structure Regulates pre-mRNA Processing
7.0K
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
7.0K
RNA Stability
33.6K
Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
33.6K
Nonsense-mediated mRNA Decay
10.6K
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
10.6K

