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Updated: Jul 12, 2025

Author Spotlight: Integrating BRET-Based Assays and Rare Mutation Analysis to Decipher RAF Kinase Regulation in Live Cells
Published on: March 1, 2024
Spitz tumor with RAF1 fusion: A report of 3 cases
Michele Donati1, Daniel Nosek2, Shantel Olivares3
1Department of Pathology, Fondazione Policlinico Universitario Campus Bio-Medico, Rome, Italy.
Abstract:
Spitz tumors are melanocytic neoplasms morphologically characterized by spindled and/or epithelioid cells and specific stromal and epidermal changes associated with mutually exclusive fusion kinases involving ALK, ROS1, NTRK1, NTRK2, NTRK3, MET and RET, BRAF and MAP3K8 genes or, less commonly, HRAS mutation. RAF1 fusions have been recently detected in cutaneous melanocytic neoplasms, including conventional melanoma, congenital nevus and BAP-1 inactivated tumors. We report herewith three Spitz neoplasms with a RAF1 fusion, including a previously reported CTDSPL::RAF1 fusion and two novel PPAP2B::RAF1 and ATP2B4::RAF1 fusions. Two cases were classified as Spitz nevus, while the remaining neoplasm was classified as Spitz melanoma at the time of the diagnosis, given 9p21 homozygous deletion and positive sentinel lymph node biopsy. We suggest that RAF1 fused melanocytic neoplasms can represent a novel subgroup of Spitz tumors, with a RAF1 fusion representing an oncogenic driver.
Insights
RAF1 fusions are identified in Spitz tumors, a type of melanocytic neoplasm. These findings suggest RAF1-fused melanocytic neoplasms may constitute a distinct subgroup of Spitz tumors, driven by RAF1 gene fusions.
Area of Science:
- Dermatology
- Oncology
- Molecular Pathology
Background:
- Spitz tumors are melanocytic neoplasms characterized by specific cellular and stromal changes.
- Known genetic alterations include fusions of ALK, ROS1, NTRK, MET, RET, BRAF, MAP3K8, and HRAS mutations.
- RAF1 fusions have recently been identified in various cutaneous melanocytic neoplasms.
Observation:
- This study reports three cases of Spitz neoplasms harboring RAF1 fusions.
- These include one previously described CTDSPL::RAF1 fusion and two novel fusions: PPAP2B::RAF1 and ATP2B4::RAF1.
- Two cases were diagnosed as Spitz nevus, and one as Spitz melanoma.
Findings:
- The identified RAF1 fusions (CTDSPL::RAF1, PPAP2B::RAF1, ATP2B4::RAF1) represent novel oncogenic drivers in melanocytic neoplasms.
- The Spitz melanoma case exhibited 9p21 homozygous deletion and a positive sentinel lymph node biopsy.
- RAF1-fused melanocytic neoplasms may represent a distinct clinicopathological entity.
Implications:
- RAF1 fusions could define a new molecular subgroup within Spitz tumors.
- Understanding these genetic drivers is crucial for accurate diagnosis and potential targeted therapies.
- This research expands the spectrum of genetic alterations associated with Spitz neoplasms.
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