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Substrate Specificity of Biofilms Proximate to Historic Shipwrecks
Rachel L Mugge1, Rachel D Moseley2, Leila J Hamdan2
1U.S. Naval Research Laboratory, Ocean Sciences Division, Stennis Space Center, MS 39529, USA.
Microorganisms
|October 28, 2023
Summary
Marine biofilms on artificial structures are shaped by substrate type, not just location. Steel and wood surfaces showed distinct microbial communities and functions, impacting nutrient cycling in the ocean.
Area of Science:
- Marine microbiology
- Environmental science
- Biofouling
Background:
- Anthropogenic structures like shipwrecks and platforms are increasing on the seabed.
- These structures act as substrates for microbial biofilm formation.
- Environmental conditions and substrate characteristics influence biofilm development, but their relative importance is unclear.
Purpose of the Study:
- To investigate the substrate- and site-specific effects of built structures on short-term marine biofilm composition.
- To determine whether substrate material or location is the dominant factor shaping biofilm microbiomes.
- To understand the functional potential of biofilms colonizing different artificial substrates.
Main Methods:
- Deployment of steel and wood surfaces near historic shipwrecks in the Gulf of Mexico for four months.
- DNA extraction from developed biofilms on both substrates.
- Metagenomic sequencing and subsequent bioinformatics analysis to assess taxonomic composition and functional genes.
Main Results:
- Biofilm taxonomic composition differed significantly between steel and wood substrates and among study sites.
- Substrate type was identified as the primary factor influencing biofilm community structure.
- Steel biofilms exhibited higher gene abundance for biofilm formation, sulfur, iron, and nitrogen cycling.
- Wood biofilms showed greater abundance of genes for manganese cycling and methanol oxidation.
Conclusions:
- Substrate composition is a critical determinant of marine biofilm microbiome structure and function.
- Marine biofilms on anthropogenic structures can play a role in deep-sea nutrient cycling.
- Understanding these microbiomes is essential for assessing the ecological impact of artificial seabed structures.

