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Updated: Jul 12, 2025

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
Physician services and costs after disclosure of diagnostic sequencing results in the NYCKidSeq program
Asem Berkalieva1, Nicole R Kelly2, Ashley Fisher3
1Institute for Healthcare Delivery Science, Department of Population Health Science and Policy, Icahn School of Medicine at Mount Sinai, New York, NY.
Insights
Returning diagnostic sequencing results did not significantly increase downstream physician services or costs for pediatric patients. Further large-scale studies are needed to confirm these findings on genetic testing outcomes.
Area of Science:
- Genetics
- Pediatric Medicine
- Health Economics
Background:
- Genetic disorders in children often require extensive diagnostic workups.
- Diagnostic sequencing offers a powerful tool for identifying genetic etiologies.
- Understanding the clinical and economic impact of returning these results is crucial.
Purpose of the Study:
- To evaluate the effect of returning diagnostic sequencing results on clinical actions and economic outcomes.
- To assess impacts on pediatric patients with suspected genetic disorders.
Main Methods:
- Utilized longitudinal physician claims data for patients aged 0-21 with suspected genetic disorders.
- Assessed specialist consultation rates and 18-month physician services and costs post-sequencing.
- Included patients with neurologic, cardiac, and immunologic conditions.
Main Results:
- Positive findings (72%) were more likely to prompt specialist consultation recommendations than uncertain (23%) or negative (21%) findings.
- Only 30% of recommended consultations occurred.
- No significant increases in downstream physician services or costs were observed after multivariable adjustment for positive or uncertain findings.
Conclusions:
- Returning diagnostic sequencing results did not lead to significant increases in downstream healthcare utilization or costs.
- Findings suggest that genetic sequencing may be cost-effective in this pediatric population.
- Further large-scale longitudinal studies are warranted to validate these economic and clinical outcome findings.
Purpose:
To better understand the effects of returning diagnostic sequencing results on clinical actions and economic outcomes for pediatric patients with suspected genetic disorders.
Methods:
Longitudinal physician claims data after diagnostic sequencing were obtained for patients aged 0 to 21 years with neurologic, cardiac, and immunologic disorders with suspected genetic etiology. We assessed specialist consultation rates prompted by primary diagnostic results, as well as marginal effects on overall 18-month physician services and costs.
Results:
We included data on 857 patients (median age: 9.6 years) with a median follow-up of 17.3 months after disclosure of diagnostic sequencing results. The likelihood of having ≥1 recommendation for specialist consultation in 155 patients with positive findings was high (72%) vs 23% in 443 patients with uncertain findings and 21% in 259 patients with negative findings (P < .001). Follow-through consultation occurred in 30%. Increases in 18-month physician services and costs following a positive finding diminished after multivariable adjustment. Also, no significant differences between those with uncertain and negative findings were demonstrated.
Conclusion:
Our study did not provide evidence for significant increases in downstream physician services and costs after returning positive or uncertain diagnostic sequencing findings. More large-scale longitudinal studies are needed to confirm these findings.
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