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Potential for Machine Learning to Address Data Gaps in Human Toxicity and Ecotoxicity Characterization.
Kerstin von Borries1, Hanna Holmquist2, Marissa Kosnik1
1Quantitative Sustainability Assessment, Department of Environmental and Resource Engineering, Technical University of Denmark, Bygningstorvet 115, 2800 Kgs. Lyngby, Denmark.
Machine learning (ML) can help fill data gaps for chemical toxicity assessments. This study prioritized key toxicity parameters, showing ML models can predict data for 8-46% of chemicals, even with limited existing measurements.
Area of Science:
- Environmental Chemistry
- Computational Toxicology
- Data Science
Background:
- Machine learning (ML) is increasingly used to address data gaps in chemical assessments.
- The systematic application and broad potential of ML for chemical data gaps remain underexplored.
Purpose of the Study:
- To systematically evaluate and prioritize chemical parameters for ML-based toxicity characterization.
- To assess the potential of ML to predict data across a wide range of chemicals.
Main Methods:
- Prioritized 38 chemical parameters based on toxicity relevance and data availability for ML prediction.
- Conducted chemical space analysis to evaluate ML prediction potential for diverse chemical structures.
- Assessed the percentage of chemicals with predicted data based on the availability of measured data.
Main Results:
- Identified and prioritized 13 key parameters for ML development, flagging nine with critical data gaps.
- ML approaches show potential to predict data for 8-46% of marketed chemicals.
- Prediction potential is achievable even with only 1-10% of chemicals having measured data.
Conclusions:
- This work provides a systematic framework for prioritizing parameters in ML model development for chemical toxicity.
- Results highlight the significant potential of ML to fill data gaps and broaden chemical toxicity characterization.
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