Lacibacter sediminis sp. nov., isolated from contaminated freshwater sediment

Two Gram-stain-negative bacterial strains, S13-6-6 and S13-6-22^T, were isolated from sediment sample collected at a water depth of 4 m from Lake Hongze, Jiangsu Province, PR China. The cells of strains S13-6-6 and S13-6-22^T were non-spore-forming, aerobic, non-motile and formed orange colonies on R2A agar. Comparative 16S rRNA gene sequence studies revealed a clear affiliation of the two strains with he phylum Bacteroidota, and revealed the highest pairwise sequence similarities with Lacibacter daechungensis H32-4^T (97.8 %), Lacibacter cauensis NJ-8^T (97.8 %), Lacibacter luteus TTM-7^T (97.4 %) and Lacibacter nakdongensis SS2-56^T (97.4 %). The results of phylogenetic analysis based on 16S rRNA gene sequences indicated that the strains formed a clear phylogenetic lineage with the genus Lacibacter. The major fatty acids were identified as iso-C_15 : 1G, iso-C_15 : 0, iso-C_17 : 0 3-OH and summed feature 3 (C_16 : 1ω7c and/or C_16 : 1ω6c) (>10 %), and the respiratory quinone was identified as menaquinone MK-7. The polar lipids consisted of phosphatidylethanolamine, two unidentified aminolipids, an unidentified phospholipid and six unidentified lipids. The genomic DNA G+C content was determined to be 40.2 mol% (HPLC) for strain S13-6-6 and 40.3 % (genome) for strain S13-6-22^T. The combined genotypic and phenotypic data indicated that strains S13-6-6 and S13-6-22^T represent a novel species of the genus Lacibacter, for which the name Lacibacter sediminis sp. nov. is proposed. The type strain is S13-6-22^T (=CGMCC 1.17450^T =JCM 35802^T).