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Updated: Jul 11, 2025

Quantitative PCR-based Assay to Measure Sonic Hedgehog Signaling in Cellular Model of Ciliogenesis
Published on: January 31, 2025
Context-dependent ciliary regulation of hedgehog pathway repression in tissue morphogenesis
Sun-Hee Hwang1, Kevin Andrew White1, Bandarigoda Nipunika Somatilaka1,2
1Department of Cell Biology, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America.
Primary cilia regulate tissue development by controlling GLI activators and repressors in the hedgehog pathway. This study reveals distinct modes of GLI effector control crucial for mouse neural tube and skeletal development.
Area of Science:
- Cell Biology
- Developmental Biology
- Genetics
Background:
- Tissue morphogenesis relies on subcellular signaling, with primary cilia playing a key role in compartmentalizing signaling pathways.
- The hedgehog pathway utilizes GLI transcription factors, producing both activators (GLI-A) and repressors (GLI-R), with cilia essential for their formation.
- Understanding how GLI-A/GLI-R coordinate cilia-regulated morphogenetic pathways is crucial but not well understood.
Purpose of the Study:
- To determine the specific requirements of GLI-A and GLI-R in phenotypes resulting from hedgehog pathway derepression during mouse development.
- To investigate the roles of GPR161 and ANKMY2 in cilia-mediated GLI-R generation via cAMP/protein kinase-A signaling.
- To elucidate the distinct modes of GLI effector regulation by primary cilia in tissue morphogenesis.
Main Methods:
- Genetic epistasis analysis involving mutants in Gpr161, Ankmy2, Gli2/Gli3, and Smoothened.
- Utilized a Gpr161 ciliary localization knock-in mutant to assess cAMP signaling competence independent of ciliary localization.
- Examined phenotypes in mouse neural tube and skeletal development.
Main Results:
- Cilia-dependent derepression phenotypes manifested in three distinct modes: exclusive GLI-R loss, exclusive GLI-A excess, or dual regulation.
- These modes were largely independent of the hedgehog pathway transducer Smoothened.
- A cAMP signaling-competent Gpr161 mutant recapitulated phenotypes solely through GLI-R loss, highlighting its critical role.
Conclusions:
- The study demonstrates complex, tissue-specific requirements for GLI effectors in morphogenesis.
- Primary cilia establish tissue-specific GLI-R thresholds, essential for hedgehog pathway repression.
- A framework is proposed for understanding diverse primary cilia-generated signaling modes in tissue development.
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