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Draft genome sequence of an Atlantibacter hermannii clinical strain isolated from human muscle tissue

Yan Feng1, Yu Feng2,3, Zhiyong Zong1,2,3

  • 1Center of Infectious Diseases, West China Hospital, Sichuan University , Chengdu, China.

Microbiology Resource Announcements
|December 8, 2023
PubMed

Insights

The draft genome sequence of Atlantibacter hermannii, a rare opportunistic pathogen, was obtained from a clinical isolate. This analysis revealed a 4.4 million base genome without any known plasmid replicons.

Area of Science:

  • Microbiology
  • Genomics

Background:

  • Atlantibacter hermannii is a rare opportunistic pathogen belonging to the Enterobacteriaceae family.
  • Understanding the genomic characteristics of clinical isolates is crucial for pathogen research.

Purpose of the Study:

  • To obtain and analyze the draft genome sequence of a clinical strain of Atlantibacter hermannii.

Main Methods:

  • Isolation of Atlantibacter hermannii from infected muscle tissue.
  • Whole-genome sequencing and analysis of the obtained draft genome.

Main Results:

  • The draft genome sequence of the Atlantibacter hermannii clinical strain was successfully obtained.
  • The genome comprises approximately 4.4 million bases.
  • No known plasmid replicons were identified in the genome.

Conclusions:

  • The genomic data provides a foundation for further research into Atlantibacter hermannii.
  • The absence of plasmids may influence the bacterium's genetic exchange and virulence mechanisms.
Keywords:
AtlantibacterAtlantibacter hermanniipathogen

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