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Updated: Jul 9, 2025

An Optimized Protocol for Electrophoretic Mobility Shift Assay Using Infrared Fluorescent Dye-labeled Oligonucleotides
Published on: November 29, 2016
Near-infrared fluorescent probe with large Stokes shift for specific detection of lysine
Jirui Yu1, Ji Fan1, Yanxi Song2
1College of Chemistry and Chemical Engineering, Donghua University, Shanghai 201620, China.
Abstract:
A new near-infrared (NIR) fluorescent probe CL based on coumarin- dicyanoisophorone was synthesized. Addition of Lys to probe CL solution in DMF/H2O (9:1, v/v) medium resulted in noticeable enhancement in the intensity of the fluorescence emission at 702 nm, accompanying distinct color change from yellow to pink. While addition of other amino acids and biothiols (Gly, Hcy, GSH, Glu, Val, Tyr, Arg, Trp, Lys, His, Leu, Phe, Asp and Met) did not bring about substantial changes in both fluorescence emission and color. The detection limit was calculated to be 0.51 μM. Job's plot test revealed that probe CL and Lys formed a complex of 1:1 stoichiometry. Probe CL showed high stability and could be used to recognize Lys in a wide pH range of 4.0-10.0. The sensing mechanism was proposed and verified by 1H NMR spectral measurement. The dual-modal fluorescence turn-on and colorimetric NIR probe with an extremely large Stokes shift of 280 nm may be utilized for highly specific and practical sensing of Lys.
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