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Machine learning-based amide proton transfer imaging using partially synthetic training data.

Malvika Viswanathan1,2, Leqi Yin3, Yashwant Kurmi1,4

  • 1Vanderbilt University Institute of Imaging Science, Vanderbilt University Medical Center, Nashville, Tennessee, USA.

Magnetic Resonance in Medicine
|December 15, 2023
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Summary
This summary is machine-generated.

This study introduces partially synthetic data for training machine learning models to predict amide proton transfer (APT) effects, improving accuracy and robustness in chemical exchange saturation transfer (CEST) imaging.

Keywords:
amide proton transferchemical exchange saturation transfermachine learningtumor

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Area of Science:

  • Biomedical Imaging
  • Machine Learning
  • Quantitative MRI

Background:

  • Machine learning (ML) models for chemical exchange saturation transfer (CEST) effect quantification face challenges with limited measured data or bias from fully simulated data.
  • Developing robust ML models requires addressing these data limitations in CEST imaging.

Purpose of the Study:

  • Introduce a novel platform for generating partially synthetic CEST data by combining simulated and measured components.
  • Evaluate the feasibility of using this partially synthetic data for training ML models to predict amide proton transfer (APT) effects.

Main Methods:

  • Partially synthetic CEST signals were created by combining simulated APT effects with measured components.
  • ML models were trained on partially synthetic, fully simulated, and in vivo data to predict APT effects in rat brains with 9L tumors.

Main Results:

  • Partially synthetic data enabled accurate APT prediction in tissue-mimicking experiments.
  • In vivo experiments demonstrated superior accuracy and robustness of ML models trained with partially synthetic data compared to other methods.

Conclusions:

  • Partially synthetic CEST data effectively addresses limitations of conventional ML training approaches.
  • This method offers a promising solution for enhancing the accuracy and reliability of ML-based CEST quantification.