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Published on: January 2, 2018
High-Throughput Transcriptomics of Water Extracts Detects Reductions in Biological Activity with Water Treatment
Jesse D Rogers1,2, Frederic D L Leusch3, Bryant Chambers1
1Center for Computational Toxicology and Exposure, Office of Research and Development, U.S. Environmental Protection Agency, Research Triangle Park, North Carolina 27711, United States.
High-throughput transcriptomics revealed that wastewater and surface water contaminants significantly alter gene expression in human cells. Advanced water treatment effectively reduces this bioactivity, enhancing water quality monitoring confidence.
Area of Science:
- Environmental Science
- Toxicology
- Molecular Biology
Background:
- Water supplies contain chemical contaminants from various sources, posing risks to health.
- Current chemical analyses have limitations in coverage and cost.
- Broad-coverage in vitro assays like transcriptomics can assess a wider range of potential effects.
Purpose of the Study:
- To assess the biological activity of field-derived water extracts using high-throughput transcriptomics.
- To evaluate the effectiveness of advanced water treatment on reducing bioactivity.
Main Methods:
- High-throughput transcriptomics was employed.
- MCF7 breast carcinoma cells were exposed to water extracts.
- Gene expression changes in cell proliferation, neurological, estrogenic, and antibiotic pathways were analyzed.
Main Results:
- Wastewater and surface water extracts induced significant changes in gene expression.
- Drinking and reclaimed water extracts, after advanced treatment, showed reduced bioactivity.
- Reclaimed water extracts induced fewer gene expression changes than laboratory blanks.
Conclusions:
- Transcriptomics is a valuable tool for water quality monitoring.
- Advanced water treatment significantly reduces the bioactivity of reclaimed water.
- Bioassay-based monitoring provides reliable data for water quality assessment.
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