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Characterizing Accuracy of Model Predictions for Chemical Concentration in High Throughput Screening Assays
Meredith N Scherer1,2, Madison Feshuk1, James M Armitage3
1Center for Computational Toxicology and Exposure, U.S. Environmental Protection Agency, Research Triangle Park, North Carolina 27711, United States.
Mathematical models improve in vitro-in vivo extrapolation (IVIVE) accuracy by predicting intracellular chemical concentrations. This enhances toxicological predictions by accounting for chemical distribution within assay systems.
Area of Science:
- Toxicology
- Pharmacokinetics
- Computational Chemistry
Background:
- In vitro-in vivo extrapolation (IVIVE) aims to predict whole animal effects from in vitro data.
- Current IVIVE methods often rely on nominal concentrations, neglecting chemical distribution within assay systems.
- This can lead to inaccurate estimations of intracellular concentrations and, consequently, unreliable toxicity predictions.
Purpose of the Study:
- To evaluate the accuracy of mathematical disposition models in predicting intracellular chemical concentrations for IVIVE.
- To compare the performance of the Armitage et al. (2021) and Kramer et al. (2010) models against nominal concentrations.
Main Methods:
- Utilized 153 experimental intracellular concentration measurements for 43 chemicals from 12 studies and new data.
- Evaluated two in vitro disposition models: Armitage et al. (2021) and Kramer et al. (2010).
- Compared model predictions against experimentally determined intracellular concentrations and nominal concentrations.
Main Results:
- Both the Armitage model (RMSLE = 1.12) and Kramer model (RMSLE = 1.30) provided more accurate intracellular concentration predictions than nominal concentration (RMSLE = 1.45).
- The models demonstrated improved accuracy in estimating the free concentration of chemicals available to cause effects in vitro.
Conclusions:
- Mathematical modeling of in vitro chemical distribution significantly enhances the accuracy of IVIVE for toxicological assessments.
- These disposition models offer a valuable tool for refining dose extrapolation and improving the prediction of potential adverse effects.
- Further research with expanded datasets is warranted to fully leverage the potential of these modeling approaches.
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