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Updated: Jul 4, 2025

Following the Dynamics of Structural Variants in Experimentally Evolved Populations
Published on: February 3, 2023
Bernoulli factories and duality in Wright-Fisher and Allen-Cahn models of population genetics
Jere Koskela1, Krzysztof Łatuszyński2, Dario Spanò2
1School of Mathematics, Statistics and Physics, Newcastle University, Newcastle upon Tyne, NE1 7RU, UK; Department of Statistics, University of Warwick, Coventry CV4 7AL, UK.
Abstract:
Mathematical models of genetic evolution often come in pairs, connected by a so-called duality relation. The most seminal example are the Wright-Fisher diffusion and the Kingman coalescent, where the former describes the stochastic evolution of neutral allele frequencies in a large population forwards in time, and the latter describes the genetic ancestry of randomly sampled individuals from the population backwards in time. As well as providing a richer description than either model in isolation, duality often yields equations satisfied by quantities of interest. We employ the so-called Bernoulli factory - a celebrated tool in simulation-based computing - to derive duality relations for broad classes of genetics models. As concrete examples, we present Wright-Fisher diffusions with general drift functions, and Allen-Cahn equations with general, nonlinear forcing terms. The drift and forcing functions can be interpreted as the action of frequency-dependent selection. To our knowledge, this work is the first time a connection has been drawn between Bernoulli factories and duality in models of population genetics.
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