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Updated: Jul 4, 2025

Brain Infarct Segmentation and Registration on MRI or CT for Lesion-symptom Mapping
Published on: September 25, 2019
Random expert sampling for deep learning segmentation of acute ischemic stroke on non-contrast CT.
Sophie Ostmeier1, Brian Axelrod2, Yongkai Liu1
1Department of Radiology, Stanford University, Stanford, California, USA.
A novel random model for segmenting ischemic tissue on non-contrast CT scans outperformed expert agreement and majority voting methods. This deep learning approach accurately predicts infarct core volume and correlates with patient outcomes.
Area of Science:
- Medical Imaging
- Artificial Intelligence in Medicine
- Neurology
Background:
- Accurate delineation of acutely infarcted brain tissue on non-contrast CT is crucial but challenging due to limited inter-reader agreement among human experts.
- Supervised deep learning offers a potential solution, but optimal training strategies for segmenting ischemic tissue remain under investigation.
Purpose of the Study:
- To compare the performance of two deep learning training methods for segmenting ischemic brain tissue on non-contrast CT: majority vote from expert segmentations versus random sampling of individual expert segmentations.
- To evaluate the agreement of the deep learning models with expert consensus and with 24-hour follow-up diffusion-weighted imaging (DWI) infarct core volumes.
- To assess the correlation of model-derived infarct volumes with clinical outcomes.
Main Methods:
- A U-Net deep learning model was trained using data from 260 non-contrast CT studies of acute ischemic stroke patients (DEFUSE 3 trial) and validated with 33 external cases.
- Two training schemes were employed: (1) majority vote from three expert neuroradiologists' segmentations, and (2) random sampling from individual expert segmentations.
- Segmentation performance was assessed using volume, overlap (Dice score), and distance metrics, compared against inter-expert agreement and each other using Wilcoxon signed rank tests.
Main Results:
- The random expert sampling model achieved significantly higher Dice scores (0.51±0.04) compared to both inter-expert agreement (0.36±0.05) and the majority vote model (0.45±0.05).
- The random model's predicted infarct volume showed a significant correlation with 90-day modified Rankin Scale (mRS) scores, unlike the median expert or majority models.
- No significant differences were observed in volume correlations between the models and the 24-hour follow-up DWI infarct core volume.
Conclusions:
- A deep learning model trained on random expert segmentations demonstrates superior performance in delineating ischemic injury on non-contrast CT compared to majority vote and inter-expert agreement.
- The volumetric measurements from the random model are consistent with final infarct core volumes determined by 24-hour follow-up DWI and correlate with clinical outcomes.
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