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Health Information Technology and Healthcare Information System

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CyVerse: Cyberinfrastructure for open science.

Tyson L Swetnam1, Parker B Antin1, Ryan Bartelme1,2

  • 1The University of Arizona, Tucson, Arizona, United States of America.

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|February 7, 2024
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Summary
This summary is machine-generated.

CyVerse provides open-source cyberinfrastructure, enabling data-driven life sciences research through Software as a Service (SaaS) and Infrastructure as Code (IaC). This blueprint details managing such advanced, accessible research platforms.

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Area of Science:

  • Life Sciences
  • Computational Biology
  • Bioinformatics

Background:

  • CyVerse has been a leading open-source cyberinfrastructure for life sciences since the 2010s.
  • The evolution of cloud computing, machine learning, and AI necessitates adaptable research platforms.

Purpose of the Study:

  • To present a strategic blueprint for creating and managing Software as a Service (SaaS) cyberinfrastructure and Infrastructure as Code (IaC).
  • To guide the development and deployment of open-source, cloud-native research platforms.

Main Methods:

  • Leveraging interfaces, SaaS, and IaC to integrate diverse computational resources and custom software.
  • Enabling researchers to perform analyses and publish data adhering to open science principles.

Main Results:

  • CyVerse has supported over 1,600 publications and trained 45,000 users since 2011.
  • The platform has over 124,000 accounts from 160 countries and has been deployed internationally and privately.

Conclusions:

  • CyVerse demonstrates the successful implementation and scalability of open-source SaaS and IaC for research.
  • The presented blueprint offers a model for sustainable, accessible cyberinfrastructure development.