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Updated: Jul 2, 2025

Applying Advanced In Vitro Culturing Technology to Study the Human Gut Microbiota
Published on: February 15, 2019
Advances in Culturomics Research on the Human Gut Microbiome: Optimizing Medium Composition and Culture Techniques
Hye Seon Song1, Yeon Bee Kim2, Joon Yong Kim3
1Division of Environmental Materials, Honam National Institute of Biological Resource (HNIBR), Mokpo 58762, Republic of Korea.
Abstract:
Despite considerable advancements achieved using next-generation sequencing technologies in exploring microbial diversity, several species of the gut microbiome remain unknown. In this transformative era, culturomics has risen to prominence as a pivotal approach in unveiling realms of microbial diversity that were previously deemed inaccessible. Utilizing innovative strategies to optimize growth and culture medium composition, scientists have successfully cultured hard-to-cultivate microbes. This progress has fostered the discovery and understanding of elusive microbial entities, highlighting their essential role in human health and disease paradigms. In this review, we emphasize the importance of culturomics research on the gut microbiome and provide new theories and insights for expanding microbial diversity via the optimization of cultivation conditions.

