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Updated: Jul 2, 2025

Detection of Mitochondria Membrane Potential to Study CLIC4 Knockdown-induced HN4 Cell Apoptosis In Vitro
Published on: July 17, 2018
NEMF-mediated Listerin-independent mitochondrial translational surveillance by E3 ligase Pirh2 and mitochondrial
Liang Lv1, Jinyou Mo2, Yumin Qing3
1Department of Gastroenterology, The Second Xiangya Hospital of Central South University, Changsha, Hunan 410011, China.
Abstract:
The ribosome-associated protein quality control (RQC) pathway acts as a translational surveillance mechanism to maintain proteostasis. In mammalian cells, the cytoplasmic RQC pathway involves nuclear export mediator factor (NEMF)-dependent recruitment of the E3 ligase Listerin to ubiquitinate ribosome-stalled nascent polypeptides on the lysine residue for degradation. However, the quality control of ribosome-stalled nuclear-encoded mitochondrial nascent polypeptides remains elusive, as these peptides can be partially imported into mitochondria through translocons, restricting accessibility to the lysine by Listerin. Here, we identify a Listerin-independent organelle-specific mitochondrial RQC pathway that acts on NEMF-mediated carboxy-terminal poly-alanine modification. In the pathway, mitochondrial proteins carrying C-end poly-Ala tails are recognized by the cytosolic E3 ligase Pirh2 and the ClpXP protease in the mitochondria, which coordinately clear ribosome-stalled mitochondrial nascent polypeptides. Defects in this elimination pathway result in NEMF-mediated aggregates and mitochondrial integrity failure, thus providing a potential molecular mechanism of the RQC pathway in mitochondrial-associated human diseases.
Insights
Scientists discovered a new mitochondrial quality control pathway that clears stalled proteins. This pathway, independent of Listerin, uses Pirh2 and ClpXP to prevent mitochondrial damage and disease.
Area of Science:
- Molecular Biology
- Cell Biology
- Mitochondrial Biology
Background:
- The ribosome-associated protein quality control (RQC) pathway maintains cellular proteostasis by degrading stalled translation products.
- In mammalian cells, cytoplasmic RQC utilizes Listerin E3 ligase for ubiquitination and degradation of stalled nascent polypeptides.
- Quality control for nuclear-encoded mitochondrial nascent polypeptides is poorly understood due to partial mitochondrial import.
Purpose of the Study:
- To elucidate the quality control mechanisms for nuclear-encoded mitochondrial nascent polypeptides.
- To identify the factors and pathways involved in clearing ribosome-stalled mitochondrial proteins.
- To investigate the role of this pathway in mitochondrial integrity and associated diseases.
Main Methods:
- Investigated the role of nuclear export mediator factor (NEMF) in mitochondrial protein quality control.
- Identified novel E3 ligases and proteases involved in the degradation of stalled mitochondrial polypeptides.
- Utilized cell-based assays to assess mitochondrial integrity and protein aggregation upon pathway disruption.
Main Results:
- Discovered a Listerin-independent, organelle-specific mitochondrial RQC pathway.
- This pathway involves NEMF-mediated carboxy-terminal poly-alanine modification.
- The cytosolic E3 ligase Pirh2 and mitochondrial ClpXP protease coordinate the clearance of stalled mitochondrial nascent polypeptides.
- Defects in this pathway lead to NEMF-mediated aggregates and mitochondrial integrity failure.
Conclusions:
- A novel mitochondrial RQC pathway involving Pirh2 and ClpXP clears stalled mitochondrial nascent polypeptides.
- This pathway is crucial for maintaining mitochondrial integrity and preventing the accumulation of aberrant proteins.
- Dysfunction of this pathway may contribute to mitochondrial-associated human diseases.
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