Related Experiment Video
Updated: Jul 1, 2025

Identifying PD-1/PD-L1 Inhibitors with Surface Plasmon Resonance Technology
Published on: May 2, 2025
The FLRT3-UNC5B checkpoint pathway inhibits T cell-based cancer immunotherapies
Kushal Prajapati1, Chuan Yan2,3, Qiqi Yang2,3
1NextCure Inc., Beltsville, MD 20705, USA.
Abstract:
Cancers exploit coinhibitory receptors on T cells to escape tumor immunity, and targeting such mechanisms has shown remarkable clinical benefit, but in a limited subset of patients. We hypothesized that cancer cells mimic noncanonical mechanisms of early development such as axon guidance pathways to evade T cell immunity. Using gain-of-function genetic screens, we profiled axon guidance proteins on human T cells and their cognate ligands and identified fibronectin leucine-rich transmembrane protein 3 (FLRT3) as a ligand that inhibits T cell activity. We demonstrated that FLRT3 inhibits T cells through UNC5B, an axon guidance receptor that is up-regulated on activated human T cells. FLRT3 expressed in human cancers favored tumor growth and inhibited CAR-T and BiTE + T cell killing and infiltration in humanized cancer models. An FLRT3 monoclonal antibody that blocked FLRT3-UNC5B interactions reversed these effects in an immune-dependent manner. This study supports the concept that axon guidance proteins mimic T cell checkpoints and can be targeted for cancer immunotherapy.
Insights
Cancer cells use axon guidance pathways to evade T cell immunity. Targeting fibronectin leucine-rich transmembrane protein 3 (FLRT3) with antibodies can restore anti-tumor immune responses.
Area of Science:
- Immunology
- Neuroscience
- Oncology
Background:
- Cancer immune evasion often involves coinhibitory receptors on T cells.
- Current immunotherapies benefit only a subset of patients.
- Cancer cells may adopt developmental pathways, like axon guidance, to escape immune surveillance.
Purpose of the Study:
- To investigate if axon guidance pathways are exploited by cancer cells to inhibit T cell immunity.
- To identify specific axon guidance molecules involved in cancer immune evasion.
- To explore targeting these molecules for novel cancer immunotherapy strategies.
Main Methods:
- Utilized gain-of-function genetic screens to profile axon guidance proteins on human T cells.
- Identified fibronectin leucine-rich transmembrane protein 3 (FLRT3) and its receptor UNC5B.
- Tested FLRT3 function in humanized cancer models and evaluated antibody blockade efficacy.
Main Results:
- Identified FLRT3 as a T cell inhibitory ligand that binds to the UNC5B receptor, which is upregulated on activated T cells.
- FLRT3 expression in human cancers promoted tumor growth and impaired CAR-T and BiTE+T cell-mediated killing and infiltration.
- A monoclonal antibody blocking FLRT3-UNC5B interaction reversed tumor-promoting effects in an immune-dependent manner.
Conclusions:
- Axon guidance pathways, specifically the FLRT3-UNC5B axis, are mimicked by cancer cells to create immune checkpoints.
- Targeting the FLRT3-UNC5B interaction represents a promising strategy for enhancing cancer immunotherapy efficacy.
Related Concept Videos
Tumor Immunotherapy
Inhibition of Cdk Activity
Targeted Cancer Therapies
There are several types of targeted therapies against...
Mitogens and the Cell Cycle
The Intrinsic Apoptotic Pathway
Cancer-Critical Genes II: Tumor Suppressor Genes
When the function of certain critical genes, especially those involved in cell cycle regulation and cell growth signaling cascades, gets disrupted, it upsets the cell cycle progression. Such cells with unchecked cell cycles start proliferating uncontrollably and eventually develop into tumors.
Such genes that act...

