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Published on: September 18, 2014
Non-canonical isoforms of the mRNA polyadenylation factor WDR33 regulate STING-mediated immune responses
1Department of Biological Sciences, Columbia University, New York, NY 10027, USA.
Abstract:
The human WDR33 gene encodes three major isoforms. The canonical isoform WDR33v1 (V1) is a well-characterized nuclear mRNA polyadenylation factor, while the other two, WDR33v2 (V2) and WDR33v3 (V3), have not been studied. Here, we report that V2 and V3 are generated by alternative polyadenylation, and neither protein contains all seven WD (tryptophan-aspartic acid) repeats that characterize V1. Surprisingly, V2 and V3 are not polyadenylation factors but localize to the endoplasmic reticulum and interact with stimulator of interferon genes (STING), the immune factor that induces the cellular response to cytosolic double-stranded DNA. V2 suppresses interferon-β induction by preventing STING disulfide oligomerization but promotes autophagy, likely by recruiting WIPI2 isoforms. V3, on the other hand, functions to increase STING protein levels. Our study has not only provided mechanistic insights into STING regulation but also revealed that protein isoforms can be functionally completely unrelated, indicating that alternative mRNA processing is a more powerful mechanism than previously appreciated.
Insights
The WDR33 gene produces three protein variants. Two variants, WDR33v2 and WDR33v3, regulate the immune factor STING and cellular responses, revealing diverse functions beyond mRNA polyadenylation.
Area of Science:
- Molecular Biology
- Immunology
- Cell Biology
Background:
- The WDR33 gene encodes three major isoforms: WDR33v1, WDR33v2, and WDR33v3.
- WDR33v1 is a known nuclear mRNA polyadenylation factor.
- The functions of WDR33v2 and WDR33v3 were previously uncharacterized.
Purpose of the Study:
- To investigate the functions of WDR33v2 and WDR33v3.
- To explore the role of these isoforms in cellular processes and immune responses.
- To understand the regulatory mechanisms of the stimulator of interferon genes (STING) pathway.
Main Methods:
- Analysis of alternative polyadenylation in WDR33 gene expression.
- Protein localization studies using endoplasmic reticulum markers.
- Co-immunoprecipitation assays to identify protein interactions with STING.
- Assessment of interferon-β induction and autophagy markers.
- Investigation of STING protein levels and oligomerization.
Main Results:
- WDR33v2 and WDR33v3 are generated by alternative polyadenylation and lack full WD repeats.
- These isoforms localize to the endoplasmic reticulum and interact with STING.
- WDR33v2 suppresses interferon-β induction by inhibiting STING oligomerization and promotes autophagy.
- WDR33v3 enhances STING protein levels.
- The study reveals functionally distinct roles for WDR33 isoforms.
Conclusions:
- Alternative polyadenylation generates functionally divergent WDR33 protein isoforms.
- WDR33v2 and WDR33v3 play critical roles in regulating the innate immune response via STING.
- These findings highlight the significant impact of alternative mRNA processing on protein function and cellular regulation.
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