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Updated: Jul 1, 2025

Multiparametric Tumor Organoid Drug Screening Using Widefield Live-Cell Imaging for Bulk and Single-Organoid Analysis
Published on: December 23, 2022
Integration of pan-omics technologies and three-dimensional in vitro tumor models: an approach toward drug discovery
Anmi Jose1, Pallavi Kulkarni2, Jaya Thilakan2
1Department of Pharmacy Practice, Manipal College of Pharmaceutical Sciences, Manipal Academy of Higher Education, Manipal, Karnataka, 576104, India.
Abstract:
Despite advancements in treatment protocols, cancer is one of the leading cause of deaths worldwide. Therefore, there is a need to identify newer and personalized therapeutic targets along with screening technologies to combat cancer. With the advent of pan-omics technologies, such as genomics, transcriptomics, proteomics, metabolomics, and lipidomics, the scientific community has witnessed an improved molecular and metabolomic understanding of various diseases, including cancer. In addition, three-dimensional (3-D) disease models have been efficiently utilized for understanding disease pathophysiology and as screening tools in drug discovery. An integrated approach utilizing pan-omics technologies and 3-D in vitro tumor models has led to improved understanding of the intricate network encompassing various signalling pathways and molecular cross-talk in solid tumors. In the present review, we underscore the current trends in omics technologies and highlight their role in understanding genotypic-phenotypic co-relation in cancer with respect to 3-D in vitro tumor models. We further discuss the challenges associated with omics technologies and provide our outlook on the future applications of these technologies in drug discovery and precision medicine for improved management of cancer.
Insights
Pan-omics technologies combined with 3-D tumor models offer new insights into cancer. This integrated approach aids in identifying personalized therapeutic targets and advancing precision medicine for better cancer management.
Area of Science:
- Oncology and Molecular Biology
- Biotechnology and Bioinformatics
Background:
- Cancer remains a leading global cause of death despite treatment advances.
- There is a critical need for novel, personalized therapeutic targets and effective screening technologies.
- Pan-omics technologies (genomics, transcriptomics, proteomics, metabolomics, lipidomics) have enhanced molecular understanding of diseases like cancer.
Purpose of the Study:
- To review current trends in omics technologies and their application in cancer research.
- To highlight the role of omics in understanding genotype-phenotype correlations using 3-D in vitro tumor models.
- To discuss challenges and future prospects of omics in cancer drug discovery and precision medicine.
Main Methods:
- Review of current literature on pan-omics technologies and 3-D in vitro tumor models.
- Analysis of integrated approaches combining omics data with 3-D tumor models.
- Discussion of genotype-phenotype correlations in solid tumors.
Main Results:
- Integrated omics and 3-D tumor models improve understanding of complex signaling pathways and molecular crosstalk in solid tumors.
- These approaches facilitate the identification of genotype-phenotype relationships crucial for personalized cancer therapy.
- The synergy between omics and 3-D models enhances disease pathophysiology insights and drug screening capabilities.
Conclusions:
- The integration of pan-omics technologies with 3-D in vitro tumor models represents a significant advancement in cancer research.
- This combined strategy is pivotal for discovering novel therapeutic targets and developing precision medicine approaches.
- Addressing current challenges will unlock the full potential of these technologies for improved cancer management and patient outcomes.
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