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Updated: Jun 30, 2025

Investigating Receptor-ligand Systems of the Cellulosome with AFM-based Single-molecule Force Spectroscopy
Published on: December 20, 2013
A cellulosomal double-dockerin module from Clostridium thermocellum shows distinct structural and cohesin-binding
Chao Chen1,2,3,4, Hongwu Yang1, Sheng Dong1,2,3,4
1CAS Key Laboratory of Biofuels, Shandong Provincial Key Laboratory of Synthetic Biology, Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao, China.
Tandem double-dockerin modules in cellulosomes, rare components of anaerobic bacteria, have unclear assembly roles. This study reveals their structure, binding preferences, and potential for diverse cellulosome complexity.
Area of Science:
- Biochemistry
- Molecular Biology
- Biotechnology
Background:
- Cellulosomes are complex enzyme systems in anaerobic bacteria crucial for cellulose degradation.
- Cellulosome assembly involves cohesin-enzyme interactions, with scaffoldin proteins organizing enzymes via dockerin modules.
- The function of rare tandem dockerin modules remains largely unknown.
Purpose of the Study:
- To elucidate the structure and assembly mechanism of a novel tandem bimodular double-dockerin from Clostridium thermocellum.
- To investigate the binding interactions of this double-dockerin with cohesin modules.
Main Methods:
- X-ray crystallography and Nuclear Magnetic Resonance (NMR) spectroscopy for structural determination.
- Isothermal titration calorimetry and NMR titration for analyzing binding affinities and interactions.
Main Results:
- The double-dockerin possesses two type I dockerin folds with inter-module interactions.
- It preferentially binds the scaffoldin ScaD via the first dockerin, while the second dockerin shows no binding to resident cohesins.
- Higher affinity was observed for a cohesin from Clostridium cellulolyticum's CipC scaffoldin.
Conclusions:
- The study provides structural and interaction insights into double-dockerin modules, suggesting a role in cellulosome complexity.
- Findings pave the way for functional studies on multiple-dockerin modules and associated proteases.
- Highlights the intricate diversity of cellulosome assembly mechanisms.
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