Deciphering "Immaturity-Stemness" in Human Epidermal Stem Cells at the Levels of Protein-Coding and Non-Coding
Tatiana Vinasco-Sandoval1,2,3, Gilles Lemaître2,4, Pascal Soularue1,2
1Université Paris-Saclay, 91190 Gif-sur-Yvette, France.
International Journal of Molecular Sciences
|March 28, 2024
Summary
Researchers explored molecular regulators of human skin stem cell renewal. Down-regulating KLF4 or MXD4 enhanced stemness, revealing new insights into keratinocyte stem cell regulation and potential therapeutic targets.
Area of Science:
- Dermatology
- Stem Cell Biology
- Molecular Biology
Background:
- The epidermis contains epithelial stem cells crucial for skin renewal and regeneration.
- Human skin stem cell molecular characteristics are not fully understood.
- Keratinocyte stem and precursor cells in human interfollicular epidermis regulate stemness versus differentiation.
Purpose of the Study:
- Investigate regulatory functions of KLF4/TGFB1 and MAD4/MAX/MYC pathways in keratinocyte stemness.
- Identify molecular regulators controlling the balance between stemness and differentiation in human skin stem cells.
- Integrate coding and non-coding genomic elements to understand stemness regulation.
Main Methods:
- Utilized RNA interference to down-modulate KLF4 and MXD4/MAD4.
- Performed RNA-sequencing to assess transcriptional changes.
- Implemented computational approaches to integrate coding genome, long non-coding RNAs (lncRNAs), and micro-RNAs (miRNAs).
Main Results:
- Down-modulation of KLF4 or MXD4/MAD4 promoted enhanced stemness in keratinocyte stem cells.
- Significant transcriptional changes were observed following gene down-modulation.
- Identified putative regulons linking coding and non-coding transcripts, including lncRNAs and miRNAs.
Conclusions:
- KLF4 and MXD4/MAD4 play key roles in controlling keratinocyte stemness.
- A computational approach integrating multi-omics data provides a comprehensive view of stemness regulation.
- Identified novel candidate effectors for stemness regulation in human skin stem cells, paving the way for functional validation.
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