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Updated: Jun 29, 2025

Isolation and Identification of Waterborne Antibiotic-Resistant Bacteria and Molecular Characterization of their Antibiotic Resistance Genes
Published on: March 3, 2023
Predicting Antibiotic Resistance and Assessing the Risk Burden from Antibiotics: A Holistic Modeling Framework in a
Xuneng Tong1,2, Shin Giek Goh2, Sanjeeb Mohapatra2
1Department of Civil & Environmental Engineering, National University of Singapore, 1 Engineering Drive 2, Singapore 117576, Singapore.
Predicting antimicrobial resistance (AMR) hotspots in aquatic environments is vital. This study developed a hybrid model to forecast antibiotic and resistant bacteria levels, identifying trimethoprim as a higher AMR risk and sulfamethoxazole as a higher ecological risk.
Area of Science:
- Environmental Science
- Microbiology
- Computational Modeling
Background:
- Antimicrobial resistance (AMR) in aquatic ecosystems poses significant risks.
- Effective prediction of AMR hotspots is crucial for risk management.
- Tropical reservoirs are important aquatic environments requiring AMR monitoring.
Purpose of the Study:
- To develop and validate an integrated modeling framework for predicting the spatiotemporal abundance of antibiotics, indicator bacteria, and antibiotic-resistant bacteria (ARB).
- To assess the potential AMR risks associated with specific antibiotics and bacteria in a tropical reservoir.
- To establish a hybrid modeling approach for holistic AMR prediction and risk management.
Main Methods:
- Developed a hybrid modeling framework integrating statistical and process-based models.
- Focused on sulfamethoxazole (SMX) and trimethoprim (TMP) antibiotics, and *Escherichia coli* (*E. coli*) and its resistant variant (EC_SXT).
- Validated the model using withheld data, achieving high performance metrics (NSE > 0.79, ARD < 25%, R² > 0.800).
Main Results:
- Predicted SMX concentrations of 1-15 ng/L and TMP concentrations of 0.5-5 ng/L.
- Predicted *E. coli* abundance from 0 to 5 (log10 MPN/100 mL) and EC_SXT from -1.1 to 3.5 (log10 CFU/100 mL).
- Risk assessment indicated TMP poses a higher risk for AMR development, while SMX presents a greater ecological risk.
Conclusions:
- The study successfully established a validated hybrid modeling framework for predicting AMR in aquatic ecosystems.
- The findings highlight differential risks posed by SMX and TMP, informing targeted management strategies.
- This integrated approach facilitates enhanced risk management frameworks for aquatic environments.
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