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High-throughput Detection of Respiratory Pathogens in Animal Specimens by Nanoscale PCR
Published on: November 28, 2016
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Using serosurveys to optimize surveillance for zoonotic pathogens.
E Clancey1, S L Nuismer2, S N Seifert1
1Paul G. Allen School for Global Health, Washington State University, Pullman, WA 99164 USA.
Biorxiv : the Preprint Server for Biology
|April 2, 2024
Summary
Identifying animal reservoirs for zoonotic pathogens is crucial. This study presents a model using serosurveillance data to predict peak pathogen prevalence, optimizing field sampling for elusive viruses like Ebolavirus.
Area of Science:
- Epidemiology
- Wildlife Health
- Disease Ecology
Background:
- Zoonotic pathogens pose significant global health risks, causing diseases, epidemics, and pandemics.
- Identifying animal reservoirs for zoonotic pathogens is challenging, especially when pathogen prevalence is seasonal.
- Effective surveillance requires optimized field sampling strategies.
Purpose of the Study:
- To develop a general statistical model for predicting peak pathogen prevalence in animal populations.
- To optimize field sampling efforts for detecting elusive zoonotic pathogens.
- To guide future surveillance and potentially predict spillover events.
Main Methods:
- Developed a general statistical model leveraging routine serosurveillance data.
- Validated the model using simulated datasets to assess its reliability in predicting peak prevalence.
- Applied the model to publicly available serosurveillance data from Ebolavirus reservoir bat species (Eidolon helvum and Hypsignathus monstrosus).
Main Results:
- The developed methodology reliably identifies time windows of expected peak pathogen prevalence.
- The model successfully predicted peak prevalence periods using simulated and real-world bat serosurveillance data.
- Demonstrated the model's applicability to Ebolavirus reservoirs.
Conclusions:
- The model provides a broadly applicable and simple method for optimizing field sampling for elusive pathogens.
- Predicting seasonal peaks in prevalence can enhance the detection of active infections in reservoir species.
- The methodology can inform strategies to mitigate zoonotic disease risks and potentially forecast spillover events.
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