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Updated: Jun 29, 2025

A Guide to Production, Crystallization, and Structure Determination of Human IKK1/α
Published on: November 2, 2018
High-resolution cryo-EM of a small protein complex: The structure of the human CDK-activating kinase
1Division of Structural Biology, The Institute of Cancer Research, London SW3 6JB, UK.
Abstract:
The human CDK-activating kinase (CAK) is a multifunctional protein complex and key regulator of cell growth and division. Because of its critical functions in regulating the cell cycle and transcription initiation, it is a key target for multiple cancer drug discovery programs. However, the structure of the active human CAK, insights into its regulation, and its interactions with cellular substrates and inhibitors remained elusive until recently due to the lack of high-resolution structures of the intact complex. This review covers the progress in structure determination of the human CAK by cryogenic electron microscopy (cryo-EM), from early efforts to recent near-atomic resolution maps routinely resolved at 2Å or better. These results were enabled by the latest cryo-EM technologies introduced after the initial phase of the "resolution revolution" and allowed the application of high-resolution methods to new classes of molecular targets, including small protein complexes that were intractable using earlier technology.
Insights
Recent advances in cryogenic electron microscopy (cryo-EM) have revealed the high-resolution structures of human CDK-activating kinase (CAK), a key target in cancer drug discovery, offering new insights into its regulation and function.
Area of Science:
- Structural Biology
- Molecular Biology
- Biochemistry
Background:
- The human CDK-activating kinase (CAK) is a crucial regulator of cell cycle progression and transcription initiation.
- CAK's critical roles make it a significant target for cancer drug discovery programs.
- Previous limitations in structural determination hindered understanding of CAK's regulation and interactions.
Purpose of the Study:
- To review the progress in determining the structure of the active human CAK complex.
- To highlight how recent technological advancements in cryo-EM have overcome previous structural barriers.
- To provide insights into the regulation and cellular interactions of human CAK.
Main Methods:
- Utilized cryogenic electron microscopy (cryo-EM) for structure determination.
- Leveraged advanced cryo-EM technologies following the 'resolution revolution'.
- Achieved near-atomic resolution maps, routinely at 2Å or better.
Main Results:
- Successfully obtained high-resolution structures of the intact human CAK complex.
- Demonstrated the capability of modern cryo-EM to resolve small, previously intractable protein complexes.
- Provided unprecedented structural insights into human CAK.
Conclusions:
- Recent cryo-EM advancements have enabled high-resolution structural determination of human CAK.
- These structures offer critical insights into CAK regulation, substrate interactions, and inhibitor binding.
- The findings pave the way for improved cancer drug discovery targeting CAK.
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