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Updated: Jun 28, 2025

Spatiotemporal Control of Protein Activity through Optogenetic Allosteric Regulation
Published on: October 4, 2024
Human V-ATPase function is positively and negatively regulated by TLDc proteins
Rebecca A Oot1, Stephan Wilkens1
1Department of Biochemistry & Molecular Biology, SUNY Upstate Medical University, Syracuse, NY 13210, USA.
Abstract:
Proteins that contain a highly conserved TLDc domain (Tre2/Bub2/Cdc16 LysM domain catalytic) offer protection against oxidative stress and are widely implicated in neurological health and disease. How this family of proteins exerts their function, however, is poorly understood. We have recently found that the yeast TLDc protein, Oxr1p, inhibits the proton pumping vacuolar ATPase (V-ATPase) by inducing disassembly of the pump. While loss of TLDc protein function in mammals shares disease phenotypes with V-ATPase defects, whether TLDc proteins impact human V-ATPase activity directly is unclear. Here we examine the effects of five human TLDc proteins, TLDC2, NCOA7, OXR1, TBC1D24, and mEAK7 on the activity of the human V-ATPase. We find that while TLDC2, TBC1D24, and the TLDc domains of OXR1 and NCOA7 inhibit V-ATPase by inducing enzyme disassembly, mEAK7 activates the pump. The data thus shed new light both on mammalian TLDc protein function and V-ATPase regulation.
Insights
Human TLDc proteins impact vacuolar ATPase (V-ATPase) activity. Some inhibit V-ATPase by causing disassembly, while one activates it, revealing new insights into V-ATPase regulation and TLDc protein function.
Area of Science:
- Biochemistry
- Molecular Biology
- Cell Biology
Background:
- Proteins with the conserved TLDc domain are crucial for cellular protection against oxidative stress and are linked to neurological health and disease.
- The precise mechanisms by which TLDc proteins function remain largely unknown.
- Previous studies showed yeast Oxr1p inhibits vacuolar ATPase (V-ATPase) by promoting its disassembly.
Purpose of the Study:
- To investigate the direct impact of five human TLDc proteins (TLDC2, NCOA7, OXR1, TBC1D24, and mEAK7) on the activity of the human V-ATPase.
- To elucidate the role of TLDc proteins in the regulation of V-ATPase function in mammals.
Main Methods:
- Assaying the activity of purified human V-ATPase in the presence of different human TLDc proteins.
- Analyzing the effect of TLDc proteins on V-ATPase assembly and disassembly using biochemical techniques.
- Comparing the functional outcomes of TLDc protein interactions with V-ATPase.
Main Results:
- TLDC2, TBC1D24, and the TLDc domains of OXR1 and NCOA7 were found to inhibit human V-ATPase activity by inducing enzyme disassembly.
- Conversely, mEAK7 was identified as an activator of human V-ATPase activity.
- These findings demonstrate differential regulation of V-ATPase by various human TLDc proteins.
Conclusions:
- Mammalian TLDc proteins exhibit diverse regulatory effects on V-ATPase activity, including both inhibition and activation.
- The study provides novel insights into the mechanisms of V-ATPase regulation by the TLDc protein family.
- Understanding these interactions is critical for elucidating the role of TLDc proteins in neurological health and disease.
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