Structural basis of selective TRPM7 inhibition by the anticancer agent CCT128930
Kirill D Nadezhdin1, Leonor Correia2, Alexey Shalygin3
1Department of Biochemistry and Molecular Biophysics, Columbia University, New York, NY, USA.
Abstract:
TRP channels are implicated in various diseases, but high structural similarity between them makes selective pharmacological modulation challenging. Here, we study the molecular mechanism underlying specific inhibition of the TRPM7 channel, which is essential for cancer cell proliferation, by the anticancer agent CCT128930 (CCT). Using cryo-EM, functional analysis, and MD simulations, we show that CCT binds to a vanilloid-like (VL) site, stabilizing TRPM7 in the closed non-conducting state. Similar to other allosteric inhibitors of TRPM7, NS8593 and VER155008, binding of CCT is accompanied by displacement of a lipid that resides in the VL site in the apo condition. Moreover, we demonstrate the principal role of several residues in the VL site enabling CCT to inhibit TRPM7 without impacting the homologous TRPM6 channel. Hence, our results uncover the central role of the VL site for the selective interaction of TRPM7 with small molecules that can be explored in future drug design.
Insights
Researchers identified how the anticancer agent CCT128930 selectively inhibits the TRPM7 channel. This discovery, focusing on the vanilloid-like site, offers new avenues for targeted cancer therapy drug design.
Area of Science:
- Molecular biology
- Pharmacology
- Structural biology
Background:
- Transient Receptor Potential (TRP) channels are implicated in numerous diseases.
- High structural similarity among TRP channels poses challenges for selective drug development.
- TRPM7 channel is crucial for cancer cell proliferation.
Purpose of the Study:
- To elucidate the molecular mechanism of selective TRPM7 inhibition by the anticancer agent CCT128930.
- To understand how CCT128930 distinguishes TRPM7 from homologous channels like TRPM6.
Main Methods:
- Cryo-electron microscopy (cryo-EM) for structural determination.
- Functional assays to assess channel activity.
- Molecular Dynamics (MD) simulations to analyze binding interactions.
Main Results:
- CCT128930 binds to the vanilloid-like (VL) site of TRPM7, stabilizing it in a closed state.
- Inhibitor binding displaces a lipid molecule from the VL site, similar to other TRPM7 inhibitors.
- Specific residues within the VL site are critical for CCT128930's selective inhibition of TRPM7 over TRPM6.
Conclusions:
- The vanilloid-like (VL) site is key for selective small molecule interaction with TRPM7.
- Understanding this mechanism provides a basis for future drug design targeting TRPM7.
- Selective TRPM7 inhibition holds potential for cancer therapy.
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