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The Pandemic Response Commons.

Matthew Trunnell1, Casey Frankenberger2, Bala Hota2

  • 1Open Commons Consortium, Chicago, IL 60607, United States.

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|April 15, 2024
PubMed
Summary
This summary is machine-generated.

The Pandemic Response Commons (PRC) is a new data platform for epidemic research, built on open-source technology. It facilitates data sharing and analysis for researchers studying pandemics.

Keywords:
data commonsdata sharingdata systemspandemicregional data commons

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Area of Science:

  • Epidemiology
  • Data Science
  • Public Health Informatics

Background:

  • Data commons are essential platforms for managing and sharing research data within a community.
  • The Pandemic Response Commons (PRC) was specifically designed to support researchers during epidemics and pandemics.

Purpose of the Study:

  • To develop and implement a robust data commons for pandemic research.
  • To establish a scalable and secure platform for managing diverse epidemiological datasets.

Main Methods:

  • The PRC utilizes the open-source Gen3 data platform.
  • A consortium of regional organizations was formed to develop and operate the PRC.
  • Data governance followed NIST SP 800-53 standards, with a consensus data model for harmonization.

Main Results:

  • A general PRC and a regional instance, the Chicagoland COVID-19 Commons, were established.
  • Curated datasets include COVID-19 case statistics, clinical data, and viral variant information.
  • The platform was configured for moderate security controls.

Conclusions:

  • A PRC should be operational before an epidemic to ensure rapid response.
  • Regional PRC instances can integrate into larger data ecosystems or data meshes for enhanced pandemic preparedness.
  • The PRC provides a valuable infrastructure for collaborative pandemic research and data sharing.