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Updated: Jun 28, 2025

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A Rapid In Vivo Bioassay for Developmentally Active Enhancers
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hoxc12/c13 as key regulators for rebooting the developmental program in Xenopus limb regeneration
Aiko Kawasumi-Kita1, Sang-Woo Lee1, Daisuke Ohtsuka1
1Laboratory for Developmental Morphogeometry, RIKEN Center for Biosystems Dynamics Research, Kobe, 650-0047, Japan.
Nature Communications
|April 22, 2024
Summary
Key genes, hoxc12/c13, reboot the developmental program during Xenopus limb regeneration. Their disruption halts regeneration, while their induction restores limited capacity, revealing crucial rebooting mechanisms.
Area of Science:
- Developmental Biology
- Regenerative Medicine
- Molecular Genetics
Background:
- Organ regeneration often mirrors embryonic development.
- Genes that re-initiate developmental programs post-injury are largely unidentified.
- Understanding these 'rebooting' mechanisms is crucial for regenerative therapies.
Purpose of the Study:
- To identify core factors that reboot the developmental program during Xenopus limb regeneration.
- To investigate the role of specific genes in regenerating complex structures.
- To explore the potential of these factors in enhancing regenerative capacity.
Main Methods:
- Transcriptomic analysis of larval limb blastema.
- Genome editing (CRISPR-Cas9) to knock out specific genes (hoxc12/c13).
- Assessing effects on cell proliferation, gene expression, and regenerative outcomes.
Main Results:
- Hoxc12 and hoxc13 exhibited the highest regeneration-specific expression in limb blastema.
- Knockout of hoxc12/c13 inhibited cell proliferation and essential developmental gene expression, leading to autopod regeneration failure.
- Normal limb development and initial blastema formation were unaffected by gene knockout.
- Inducing hoxc12/c13 expression partially restored limited froglet regenerative capacity.
Conclusions:
- Hoxc12/c13 are critical rebooting factors for the developmental program during Xenopus limb regeneration.
- These genes play a regeneration-specific role, distinct from initial development.
- Targeting hoxc12/c13 offers potential strategies to enhance regenerative capabilities.
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