Related Experiment Video
Updated: Jun 28, 2025

A Fluorescence-based Method to Study Bacterial Gene Regulation in Infected Tissues
Published on: February 19, 2019
Prophage-encoded methyltransferase drives adaptation of community-acquired methicillin-resistant Staphylococcus
Robert J Ulrich1, Magdalena Podkowik1,2, Rebecca Tierce3
1Department of Medicine, NYU Grossman School of Medicine, New York, NY, USA.
Abstract:
We recently described the evolution of a community-acquired methicillin-resistant Staphylococcus aureus (CA-MRSA) USA300 variant responsible for an outbreak of skin and soft tissue infections. Acquisition of a mosaic version of the Φ11 prophage (mΦ11) that increases skin abscess size was an early step in CA-MRSA adaptation that primed the successful spread of the clone. The present report shows how prophage mΦ11 exerts its effect on virulence for skin infection without encoding a known toxin or fitness genes. Abscess size and skin inflammation were associated with DNA methylase activity of an mΦ11-encoded adenine methyltransferase (designated pamA). pamA increased expression of fibronectin-binding protein A (fnbA; FnBPA), and inactivation of fnbA eliminated the effect of pamA on abscess virulence without affecting strains lacking pamA. Thus, fnbA is a pamA-specific virulence factor. Mechanistically, pamA was shown to promote biofilm formation in vivo in skin abscesses, a phenotype linked to FnBPA's role in biofilm formation. Collectively, these data reveal a novel mechanism-epigenetic regulation of staphylococcal gene expression-by which phage can regulate virulence to drive adaptive leaps by S. aureus.
Insights
A novel mechanism of Staphylococcus aureus virulence involves epigenetic regulation. A phage-encoded enzyme, pamA, increases skin abscess size by upregulating fibronectin-binding protein A (fnbA), promoting biofilm formation.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Community-acquired methicillin-resistant Staphylococcus aureus (CA-MRSA) USA300 has evolved variants.
- Prophage acquisition, specifically mosaic Φ11 (mΦ11), is linked to increased virulence in CA-MRSA skin infections.
Purpose of the Study:
- To elucidate the mechanism by which the mΦ11 prophage enhances CA-MRSA virulence in skin infections.
- To identify the specific genes and pathways involved in mΦ11-mediated virulence.
Main Methods:
- Investigated the role of mΦ11-encoded adenine methyltransferase (pamA) in virulence.
- Assessed the impact of pamA on fibronectin-binding protein A (fnbA) expression.
- Examined the effect of pamA and fnbA inactivation on abscess size and inflammation in vivo.
- Analyzed the role of pamA in promoting biofilm formation within skin abscesses.
Main Results:
- Abscess size and skin inflammation correlated with the DNA methylase activity of pamA.
- pamA significantly increased the expression of fnbA.
- Inactivation of fnbA abolished pamA's effect on virulence, confirming fnbA as a pamA-specific virulence factor.
- pamA was shown to promote in vivo biofilm formation in skin abscesses, mediated by FnBPA.
Conclusions:
- Phage mΦ11 regulates Staphylococcus aureus virulence through epigenetic modification via pamA.
- pamA enhances virulence by upregulating fnbA, which promotes biofilm formation in skin abscesses.
- This study reveals a novel mechanism of phage-mediated virulence regulation through epigenetic control of staphylococcal gene expression.
Related Concept Videos
Mismatch Repair
Defense Against Bacterial Pathogens
Phagocytes
Phagocytes are the frontline soldiers of the immune system. They include neutrophils and macrophages. Neutrophils are the most abundant type of white blood cell and are quickly mobilized to the site of infection. Macrophages are larger cells that patrol...
CRISPR and crRNAs
The CRISPR-Cas system stores a copy of foreign DNA in the host genome and uses it to identify the foreign DNA upon reinfection. CRISPR-Cas has three different...
Lysogenic Cycle of Bacteriophages
Antibiotic Selection
Conservative Site-specific Recombination and Phase Variation
The recognition sites for Cre recombinase called LoxP...

