Related Experiment Video
Updated: Jun 27, 2025

08:01
A Web Tool for Generating High Quality Machine-readable Biological Pathways
Published on: February 8, 2017
17.6K
A human-machine interface for automatic exploration of chemical reaction networks
Miguel Steiner1,2, Markus Reiher3,4
1ETH Zurich, Department of Chemistry and Applied Biosciences, Vladimir-Prelog-Weg 2, 8093, Zurich, Switzerland.
Nature Communications
|May 1, 2024
Summary
Automated reaction network exploration is improved with the STEERING WHEEL algorithm. This method efficiently guides exploration of complex chemical systems, aiding catalyst design and mechanism elucidation.
Area of Science:
- Computational Chemistry
- Chemical Kinetics
- Catalysis
Background:
- Autonomous reaction network exploration algorithms are crucial for understanding complex chemical processes.
- Existing methods face computational challenges due to vast reaction networks and lack flexibility in defining intermediates or constraints.
- Brute-force approaches are computationally infeasible, while pre-defined constraints limit applicability.
Purpose of the Study:
- To introduce a novel algorithm, STEERING WHEEL, for guiding automated reaction network exploration.
- To provide an intuitive and generally applicable method for focusing exploration on specific network regions.
- To enable flexible guidance of automated data generation for mechanism exploration and catalyst design.
Main Methods:
- Development of the STEERING WHEEL algorithm for unbiased automated exploration.
- Application of the algorithm to reaction mechanism elucidation of transition metal catalysts.
- Demonstration of systematic and reproducible exploration of catalytic cycles.
Main Results:
- The STEERING WHEEL algorithm effectively guides automated exploration of vast reaction networks.
- It allows for adjustable exploration objectives, accommodating both accurate calculations and high-throughput screening.
- The method facilitates focused investigation of specific regions within emerging chemical networks.
Conclusions:
- The STEERING WHEEL algorithm offers a flexible and efficient solution for navigating complex chemical reaction spaces.
- It enhances the study of catalytic cycles and aids in catalyst design and mechanism elucidation.
- This approach overcomes limitations of previous methods by providing adjustable guidance for automated chemical exploration.
Related Concept Videos
Protein-protein Interfaces
12.5K
Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a...
12.5K
Protein Networks
3.9K
An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
3.9K
Introduction to Chemical Reactions
8.7K
All chemical reactions begin with a reactant, the general term for one or more substances entering the reaction. Sodium and chloride ions, for example, are the reactants in the production of table salt. One or more substances produced by a chemical reaction are called the product. Chemical reactions follow the law of conservation of mass, which means that matter cannot be created nor destroyed in a chemical reaction. The components of the reactants—the number of atoms and the...
8.7K
Factors Influencing the Rate of Chemical Reactions
3.9K
A variety of factors influence the rate of chemical reactions. For a chemical reaction to happen, atoms must collide with enough energy to overcome the repulsion between their electrons. This energy is called activation energy. Factors influencing the rate of reaction either lower the activation energy or increase the likelihood of a successful collision.
Concentration and Pressure:
The more particles present within a given space, the more likely those particles are to bump into one another....
Concentration and Pressure:
The more particles present within a given space, the more likely those particles are to bump into one another....
3.9K

