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Two-Stage Machine Learning-Based Approach to Predict Points of Departure for Human Noncancer and
Jacob Kvasnicka1, Nicolò Aurisano2, Kerstin von Borries2
1Department of Veterinary Physiology and Pharmacology, Interdisciplinary Faculty of Toxicology, Texas A&M University, College Station, Texas 77843, United States.
Scientists developed a machine learning (ML) framework to predict health risks from chemicals lacking toxicity data. This approach identifies thousands of chemicals of moderate to high concern, improving human health risk assessment.
Area of Science:
- Computational toxicology
- Environmental health
- Machine learning applications
Background:
- Chemical Points of Departure (PODs) are essential for human health risk assessment but are lacking for most commercial chemicals due to insufficient *in vivo* toxicity data.
- Existing methods for determining PODs are limited, hindering comprehensive risk evaluation and management for a vast number of chemicals.
Purpose of the Study:
- To develop and validate a machine learning (ML) framework for predicting human-equivalent PODs for organic chemicals based on their structure.
- To assess potential human health risks for a large set of environmental chemicals using the developed ML models.
Main Methods:
- A two-stage ML framework was created: Stage 1 used ML predictions of chemical properties (from OPERA 2.9) as features.
- Stage 2 involved training random forest regression models with human-equivalent PODs derived from *in vivo* data for general noncancer (n=1,791) and reproductive/developmental effects (n=2,228).
- Robust cross-validation was employed for feature selection and error estimation.
Main Results:
- The two-stage ML models accurately predicted PODs for both general noncancer and reproductive/developmental effects, with cross-validation errors under an order of magnitude.
- Application of the models to 34,046 environmental chemicals identified several thousand chemicals of moderate concern and several hundred of high concern.
- These findings are based on estimated median population exposure levels.
Conclusions:
- The developed ML framework effectively predicts human-equivalent PODs, significantly expanding the number of chemicals that can be evaluated for health risks.
- This approach provides a scalable method for prioritizing chemicals for further toxicological investigation and risk management.
- The study highlights a substantial number of environmental chemicals requiring attention due to potential health risks.
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