Related Experiment Video
Updated: Jun 27, 2025

08:47
Monitoring eIF4F Assembly by Measuring eIF4E-eIF4G Interaction in Live Cells
Published on: May 1, 2020
3.1K
A dynamic compositional equilibrium governs mRNA recognition by eIF3
Nicholas A Ide1, Riley C Gentry1, Margaret A Rudbach2
1Department of Biological Sciences, Columbia University, New York, NY, USA.
Biorxiv : the Preprint Server for Biology
|May 7, 2024
Summary
Eukaryotic translation initiation factor 3 (eIF3) dynamically exchanges between different forms. The eIF3a subunit, not the full complex, drives mRNA binding, revealing a new model for translation initiation.
Area of Science:
- Molecular Biology
- Cell Biology
- Biochemistry
Background:
- Eukaryotic translation initiation factor 3 (eIF3) is a crucial multi-subunit complex regulating protein synthesis.
- A comprehensive understanding of how eIF3 orchestrates its diverse functions in translation initiation is lacking.
- eIF3 interacts with ribosomes and messenger RNAs (mRNAs) to facilitate translation.
Purpose of the Study:
- To elucidate the dynamic nature and compositional equilibrium of the eIF3 complex.
- To identify the specific eIF3 subspecies responsible for mRNA binding.
- To establish a mechanistic framework for eIF3's role in translation initiation.
Main Methods:
- Single-molecule light scattering microscopy was employed to study eIF3 dynamics in yeast.
- An in vitro reconstituted eIF3 system was utilized for further investigation.
- Biochemical assays were performed to complement microscopy findings.
Main Results:
- Saccharomyces cerevisiae eIF3 exists in dynamic exchange between its full complex, subcomplexes, and individual subunits.
- mRNA binding is mediated by the eIF3a subunit within specific eIF3a-containing subcomplexes, not the entire eIF3 complex.
- The study defined the subspecies involved in the dynamic compositional equilibrium of eIF3.
Conclusions:
- The findings present a mechanistic model for eIF3's function in mRNA recruitment during translation.
- This work establishes a foundational framework for investigating the multifaceted activities of eIF3.
- Understanding eIF3 dynamics is key to comprehending translation regulation.
Related Concept Videos
Nonsense-mediated mRNA Decay
10.6K
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
10.6K
Initiation of Translation
32.6K
Initiating translation is complex because it involves multiple molecules. Initiator tRNA, ribosomal subunits, and eukaryotic initiation factors (eIFs) are all required to assemble on the initiation codon of mRNA. This process consists of several steps that are mediated by different eIFs.
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
32.6K
mRNA Stability and Gene Expression
5.6K
The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability
Cis-acting Elements involved in mRNA stability
5.6K
Nuclear Export of mRNA
7.7K
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
7.7K
Regulated mRNA Transport
6.3K
In eukaryotes, transcription and translation are compartmentalized; an mRNA is first synthesized in the nucleus and then selectively transported to the cytoplasm for protein synthesis. Before transport, a pre-mRNA undergoes several steps of post-transcriptional modifications including splicing, 5' capping, and the addition of a poly-adenine tail. Various proteins bind to the pre-mRNA during these modifications. The mRNA transport takes place with the help of multiple proteins playing...
6.3K
Regulation of Expression Occurs at Multiple Steps
22.6K
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
22.6K

