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Related Concept Videos

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Related Experiment Video

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Quantitative Fundus Autofluorescence for the Evaluation of Retinal Diseases
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When Two Eyes Don't Suffice-Learning Difficult Hyperfluorescence Segmentations in Retinal Fundus Autofluorescence

Monty Santarossa1, Tebbo Tassilo Beyer1, Amelie Bernadette Antonia Scharf2

  • 1Department of Computer Science, Kiel University, 24118 Kiel, Germany.

Journal of Imaging
|May 24, 2024
PubMed
Summary

Automated segmentation of hyperfluorescence (HF) and reduced autofluorescence (RA) in retinal images is challenging due to human variability. A novel segmentation ensemble achieves expert-like performance, improving biomarker identification for retinal diseases.

Keywords:
CSCRU-Netambiguousannotationcentral serous chorioretinopathydeep learningensemblefundus autofluorescencehyperfluorescenceimage analysisinter-observer variabilityintra-observer variabilityreduced autofluorescenceretinalsegmentationternary

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Area of Science:

  • Ophthalmology
  • Medical Imaging
  • Computational Biology

Background:

  • Hyperfluorescence (HF) and reduced autofluorescence (RA) are key biomarkers in fundus autofluorescence (FAF) imaging for assessing retinal pigment epithelium (RPE) health.
  • FAF biomarkers are crucial for monitoring diseases like geographic atrophy (GA) and central serous chorioretinopathy (CSCR).
  • Human annotation of FAF images shows significant inter- and intra-grader variability, particularly for biomarker boundaries, impacting reliability.

Purpose of the Study:

  • To develop an automated method for segmenting HF and RA in FAF images that overcomes human annotation variability.
  • To evaluate the performance of a segmentation ensemble approach against expert human graders.
  • To create reliable ternary segmentations for confident biomarker identification and detection.

Main Methods:

  • A segmentation ensemble model was trained using FAF images with single annotations.
  • The ensemble's performance was evaluated by comparing its segmentations to those of multiple expert graders using Dice scores.
  • Ternary segmentations were generated using the ensemble's mean predictions and variance to classify image areas.

Main Results:

  • Human expert agreement for HF segmentation ranged from 63-80% Dice score, and for RA from 14-52%.
  • The segmentation ensemble achieved expert-like agreement, with Dice scores of 64-81% for HF and 21-41% for RA.
  • Ternary segmentations demonstrated high precision (97%) for confident background/HF identification and high recall (99%) for detecting all HF instances.

Conclusions:

  • Automated segmentation using a ensemble approach can achieve expert-level performance in identifying HF and RA in FAF images.
  • The proposed ternary segmentation method provides reliable and interpretable results, distinguishing confident biomarker regions from uncertain ones.
  • This approach offers a promising tool for objective and consistent assessment of RPE health in retinal disease monitoring.