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Efficient matrix profile computation with Euclidean distance using Eigen transformation: Performance evaluation based

James J Yang1, Anne Buu2

  • 1Department of Biostatistics and Data Science, University of Texas Health Science Center at Houston, Houston, Texas.

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Summary

This study introduces an efficient method for computing matrix profiles using Euclidean distance, crucial for analyzing time series data like heart rate patterns. The new approach significantly reduces computation time for long datasets, improving pattern discovery in wearable sensor data.

Keywords:
Euclidean distancebeat‐to‐beat intervalearly abandonmatrix profilesingular value decomposition

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Area of Science:

  • Computational data science
  • Time series analysis
  • Biomedical signal processing

Background:

  • Matrix profile is key for time series pattern discovery.
  • Existing methods use normalized Euclidean distance, unsuitable for some data.
  • Beat-to-beat interval (BBI) data from smartwatches requires Euclidean distance for heart rate analysis.

Purpose of the Study:

  • To develop an efficient matrix profile computation method using Euclidean distance for long time series.
  • To address computational challenges of Euclidean distance in matrix profile algorithms.
  • To enable better analysis of physiological data, such as e-cigarette user heart rate patterns.

Main Methods:

  • Proposed a novel methodology for Euclidean distance-based matrix profile computation.
  • Key steps include eigenspace projection, enhanced Singular Value Decomposition (SVD), an early abandon strategy, and lower bound determination using the first left singular vector.
  • Validated through simulation studies using BBI data.

Main Results:

  • Achieved significant reductions in computational time, from one-fourth to one-twentieth of conventional methods.
  • Demonstrated consistent performance across various time series and query sequence lengths.
  • Outperformed conventional methods, which degrade sharply with increased data length.

Conclusions:

  • The proposed methodology offers a computationally efficient solution for matrix profile analysis with Euclidean distance.
  • This advancement is particularly beneficial for analyzing long time series data, such as physiological signals from wearable devices.
  • Enables more effective monitoring and analysis of heart rate variability and other patterns in health applications.