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Universal inverse modeling of point spread functions for SMLM localization and microscope characterization
Sheng Liu1,2, Jianwei Chen3,4, Jonas Hellgoth2,5
1Department of Physics and Astronomy, University of New Mexico, Albuquerque, NM, USA.
Nature Methods
|June 3, 2024
Summary
We developed a universal inverse modeling of point spread functions (uiPSF) toolbox. This tool accurately models microscope point spread functions from various imaging data for enhanced microscopy applications.
Area of Science:
- Microscopy
- Optical Imaging
- Computational Imaging
Background:
- Accurate point spread function (PSF) modeling is crucial for advanced microscopy techniques.
- Existing PSF models may not capture system-specific aberrations or sample characteristics.
Purpose of the Study:
- To introduce universal inverse modeling of point spread functions (uiPSF), a versatile toolbox for inferring accurate PSF models.
- To provide a framework applicable to diverse microscopy modalities and data types.
Main Methods:
- The uiPSF toolbox infers PSF models using image stacks of fluorescent beads or blinking fluorophores.
- The framework incorporates system- and sample-specific aberrations, bead size, and channel transformations.
- It is designed as a modular framework for broad applicability.
Main Results:
- Demonstrated successful application of uiPSF across various microscopy systems, including SMLM, 4Pi-SMLM, and lattice light-sheet microscopes.
- Validated the toolbox using both bead and single-molecule blinking data.
- Showcased the ability to model complex aberrations and channel-specific characteristics.
Conclusions:
- The uiPSF toolbox offers a universal and accurate method for PSF modeling in microscopy.
- This tool enhances the performance of critical imaging tasks like single-molecule localization and deconvolution.
- It provides a flexible solution for diverse imaging needs in super-resolution microscopy.
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