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Cancer-associated Histone H3 N-terminal arginine mutations disrupt PRC2 activity and impair differentiation
Benjamin A Nacev1,2,3, Yakshi Dabas4, Matthew R Paul5
1Department of Medicine, University of Pittsburgh School of Medicine, Pittsburgh, PA, 15213, USA. ben46@pitt.edu.
Abstract:
Dysregulated epigenetic states are a hallmark of cancer and often arise from genetic alterations in epigenetic regulators. This includes missense mutations in histones, which, together with associated DNA, form nucleosome core particles. However, the oncogenic mechanisms of most histone mutations are unknown. Here, we demonstrate that cancer-associated histone mutations at arginines in the histone H3 N-terminal tail disrupt repressive chromatin domains, alter gene regulation, and dysregulate differentiation. We find that histone H3R2C and R26C mutants reduce transcriptionally repressive H3K27me3. While H3K27me3 depletion in cells expressing these mutants is exclusively observed on the minor fraction of histone tails harboring the mutations, the same mutants recurrently disrupt broad H3K27me3 domains in the chromatin context, including near developmentally regulated promoters. H3K27me3 loss leads to de-repression of differentiation pathways, with concordant effects between H3R2 and H3R26 mutants despite different proximity to the PRC2 substrate, H3K27. Functionally, H3R26C-expressing mesenchymal progenitor cells and murine embryonic stem cell-derived teratomas demonstrate impaired differentiation. Collectively, these data show that cancer-associated H3 N-terminal arginine mutations reduce PRC2 activity and disrupt chromatin-dependent developmental functions, a cancer-relevant phenotype.
Insights
Cancer-associated histone mutations in the H3 N-terminal tail disrupt repressive chromatin, altering gene regulation and impairing cell differentiation. These mutations reduce Polycomb Repressive Complex 2 (PRC2) activity, impacting developmental functions.
Area of Science:
- Epigenetics and Cancer Biology
- Chromatin Biology
- Molecular Oncology
Background:
- Dysregulated epigenetic states are a hallmark of cancer, often driven by genetic alterations in epigenetic regulators.
- Missense mutations in histones, key components of nucleosome core particles, are observed in cancer, but their oncogenic mechanisms remain largely unknown.
- Histone N-terminal tails play crucial roles in chromatin structure and gene regulation.
Purpose of the Study:
- To investigate the oncogenic mechanisms of cancer-associated histone mutations affecting arginines in the histone H3 N-terminal tail.
- To determine how these mutations impact chromatin domains, gene regulation, and cellular differentiation.
- To elucidate the functional consequences of these histone mutations in cancer development.
Main Methods:
- Analysis of histone H3 mutations (H3R2C, H3R26C) and their effects on chromatin.
- Assessment of H3K27me3 levels and distribution in cells expressing mutant histones.
- Functional assays using mesenchymal progenitor cells and teratomas to evaluate differentiation capacity.
Main Results:
- Cancer-associated histone H3 arginine mutations disrupt repressive chromatin domains and alter gene regulation.
- Mutations H3R2C and H3R26C lead to reduced levels of the repressive histone mark H3K27me3.
- Loss of H3K27me3 results in de-repression of differentiation pathways, and H3R26C expression impairs differentiation in cellular and in vivo models.
Conclusions:
- Cancer-associated H3 N-terminal arginine mutations reduce Polycomb Repressive Complex 2 (PRC2) activity.
- These mutations disrupt chromatin-dependent developmental functions, presenting a cancer-relevant phenotype.
- Understanding these mechanisms provides insights into histone mutations as drivers of oncogenesis.
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