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Estimation of soybean yield based on high-throughput phenotyping and machine learning.

Xiuni Li1,2,3, Menggen Chen1,2,3, Shuyuan He1,2,3

  • 1College of Agronomy, Sichuan Agricultural University, Chengdu, China.

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|June 21, 2024
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This study demonstrates that combining multi-angle RGB images and machine learning, specifically Gradient Boosting Decision Tree (GBDT), significantly improves soybean yield prediction accuracy. This offers a valuable tool for accelerating soybean breeding programs.

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RGBestimationmachine learningsoybeanyield

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Area of Science:

  • Agricultural Science
  • Computer Science
  • Remote Sensing

Background:

  • Soybean self-sufficiency in China is a significant concern, with high import volumes.
  • Accurate soybean yield prediction is crucial for agricultural planning and breeding.
  • RGB cameras and machine learning offer promising avenues for crop yield estimation.

Purpose of the Study:

  • To develop and evaluate machine learning models for soybean yield prediction using RGB image features.
  • To identify optimal features and model parameters for accurate yield estimation.
  • To assess the impact of multi-angle image perspectives on prediction accuracy.

Main Methods:

  • Captured RGB images of 240 soybean varieties from side and top perspectives at the R6 stage.
  • Extracted morphological, color, and textural features from the images.
  • Applied feature selection using Pearson correlation coefficient (≥0.5).
  • Developed yield estimation models using five machine learning algorithms (CatBoost, LightGBM, RF, GBDT, MLP).

Main Results:

  • Gradient Boosting Decision Tree (GBDT) emerged as the optimal model, achieving an R2 of 0.82.
  • The model demonstrated strong predictive performance with an RMSE of 1.99 g/plant and MAE of 3.12%.
  • Fusing multi-angle and multi-type image indicators enhanced soybean yield prediction accuracy.

Conclusions:

  • Machine learning models utilizing RGB image parameters show high potential for soybean yield estimation.
  • This approach provides a theoretical basis and technical support for accelerating soybean breeding.
  • The integration of multi-angle imaging and advanced algorithms is key to improving agricultural predictions.