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Augmented Memory: Sample-Efficient Generative Molecular Design with Reinforcement Learning.

Jeff Guo1,2, Philippe Schwaller1,2

  • 1Laboratory of Artificial Chemical Intelligence (LIAC), Institut des Sciences et Ingénierie Chimiques, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne 1015, Switzerland.

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Summary
This summary is machine-generated.

Designing new molecules efficiently is hard. This study introduces Augmented Memory, a novel algorithm that significantly improves sample efficiency in molecular design by reusing data, achieving state-of-the-art results.

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Area of Science:

  • Computational chemistry
  • Artificial intelligence in drug discovery
  • Materials informatics

Background:

  • Sample efficiency is a critical challenge in *de novo* molecular design, especially when using computationally expensive oracles.
  • Existing molecular generative models, particularly those using simplified molecular-input line-entry system (SMILES) with reinforcement learning, show promise but can be further optimized.
  • High-accuracy oracles often require significant computational resources, limiting practical molecular optimization within a feasible budget.

Purpose of the Study:

  • To enhance the sample efficiency of molecular generative models.
  • To develop a novel algorithm that minimizes calls to expensive computational property predictors (oracles).
  • To establish a new state-of-the-art in *de novo* molecular design.

Main Methods:

  • Implemented experience replay to improve existing algorithms.
  • Proposed a novel algorithm, Augmented Memory, combining data augmentation with experience replay.
  • Demonstrated the reusability of oracle scores for multiple model updates.

Main Results:

  • Experience replay significantly boosted the performance of several prior algorithms.
  • Augmented Memory demonstrated substantially enhanced sample efficiency across various tasks.
  • Achieved state-of-the-art performance in sample-efficient *de novo* molecular design.

Conclusions:

  • Augmented Memory offers a significant advancement in sample-efficient molecular design.
  • The algorithm is effective for exploitation tasks, drug discovery, and materials design.
  • This approach enables optimization with costly oracles under practical computational constraints.