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Updated: Jun 22, 2025

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Published on: December 22, 2023
Backbone-Determined Antiarrhythmic Structure-Activity Relationships for a Mirror Image, Oligomeric Depsipeptide
Madelaine P Thorpe1, Daniel J Blackwell2, Bjorn C Knollmann2
1Department of Chemistry and Vanderbilt Institute of Chemical Biology, Vanderbilt University, Nashville, Tennessee 37235, United States.
Researchers explored cyclic oligomeric depsipeptides (COD) and found that ent-verticilide analogs show potential as antiarrhythmic agents by inhibiting cardiac calcium channels (RyR2). Two modified compounds demonstrated reduced calcium spark activity.
Area of Science:
- Medicinal Chemistry
- Pharmacology
- Natural Products
Background:
- Cyclic oligomeric depsipeptides (COD) are natural compounds with diverse biological activities.
- Verticilide inhibits insect ryanodine receptors (RyR).
- The enantiomer, ent-verticilide, potently inhibits mammalian RyR2, a cardiac calcium channel, suggesting antiarrhythmic potential.
Purpose of the Study:
- To develop ent-verticilide as a potential antiarrhythmic agent.
- To explore structure-activity relationships (SAR) of ent-verticilide analogs.
- To synthesize and test modified ent-verticilide compounds with altered ester functionality.
Main Methods:
- Systematic modification of ent-verticilide's ester functionality to N-H and N-Me amides.
- Synthesis of 23 ent-verticilide-inspired analogs using a monomer-based platform.
- Enantioselective catalysis for analog synthesis.
- Functional assay of RyR2 activity to measure calcium spark reduction.
Main Results:
- Two out of 23 synthesized analogs showed a measurable reduction in RyR2-mediated calcium sparks.
- This highlights the potential of the non-natural enantiomeric series for therapeutic development.
- Structure-activity relationship studies identified key modifications for RyR2 inhibition.
Conclusions:
- The study validates natural product-inspired drug development, particularly focusing on less-explored enantiomeric series.
- Ent-verticilide analogs represent a promising avenue for developing novel antiarrhythmic agents targeting RyR2.
- Further research into these non-natural enantiomers could yield significant therapeutic advancements.
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