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Related Concept Videos

Mass Spectrometry: Overview01:19

Mass Spectrometry: Overview

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Mass spectrometry is an analytical technique used to determine the molecular mass and molecular formula of a compound. The basic principle of mass spectrometry is to generate ions from the analyte molecule and measure these ion abundances against their molecular mass.  One common type of ionization, known as electrospray ionization or EI, bombards the analyte molecules in the gas phase with high-energy electron beams. The electron beams displace an electron from the molecule and leave...
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Mass Spectrum: Interpretation01:24

Mass Spectrum: Interpretation

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An unknown compound can be established by identifying the molecular ion peak in the mass spectrum. The molecular ion peak is often weak or absent due to the predominance of fragmentation in high-energy electron beams. In such cases, a low-energy electron beam can be used to scan the spectrum to enhance the intensity of the molecular ion peak. Additionally, chemical ionization, field ionization, and desorption ionization spectra are used to obtain a relatively intense molecular ion peak.
To...
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Mass Spectrum01:23

Mass Spectrum

1.9K
A mass spectrum is the graphical representation of the relative abundance of the charged fragments in an analyte plotted against their mass-to-charge ratio (m/z). The plot's x axis represents the ratio of the mass of the charged fragment to the elementary charge it carries. The y axis of the plot represents the relative abundance of each charged species. The relative abundance is calculated from the signal intensity of each charged species recorded at the detector. The most intense signal...
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High-Resolution Mass Spectrometry (HRMS)01:15

High-Resolution Mass Spectrometry (HRMS)

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The resolution of a mass spectrometer depends on the efficiency of separating ions with different ion masses. The mass of an atom is approximated to the sum of the masses of protons and neutrons inside, considering the masses of protons and neutrons as equal. However, the masses of the proton (1.6726 × 10−24 g) and neutron (1.6749 × 10−24 g) are not truly equal. There is a minor error in the expression of atomic masses relative to the simplest atom of hydrogen. For...
1.3K
Mass Spectrometry: Complex Analysis01:21

Mass Spectrometry: Complex Analysis

740
Mass spectrometry is an important technique for the identification of pure compounds. However, it has some limitations for the analysis of complex mixtures, often due to excessive fragmentation making the spectrum too complicated to decipher. Mass spectrometry can be combined with suitable separation methods in sequence, forming hyphenated methods, which are useful in the analysis of complex mixtures.
GC–MS is a powerful hyphenated method commonly used in forensics and environmental...
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Mass Analyzers: Overview01:13

Mass Analyzers: Overview

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The mass analyzer is a crucial component of the mass spectrometer. In the ionization chamber, the vaporized sample is bombarded with a high-energy electron beam to generate a radical cation and further fragment into neutral molecules, radicals, and cations. A series of negatively charged accelerator plates accelerate the cations into the mass analyzer. The mass analyzer separates ions according to their mass-to-charge (m/z) ratios and then directs them to the detector. The common types of mass...
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Evaluating Molecular Complexity with Open-Source Machine Learning Approaches to Predict Process Mass Intensity.

Nicole Tin1, Mandeep Chauhan2, Kennedy Agwamba1

  • 1Analytical Sciences, Gilead Sciences Inc, Foster City, California 94404-1147, United States.

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|July 8, 2024
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Summary
This summary is machine-generated.

Green chemistry in pharmaceutical manufacturing is advanced by a new open-source tool predicting process mass intensity (PMI) targets. This tool uses molecular complexity to optimize resource efficiency and drive sustainable practices.

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Area of Science:

  • Pharmaceutical Manufacturing
  • Green Chemistry
  • Computational Chemistry

Background:

  • Process Mass Intensity (PMI) is a key metric for resource efficiency in pharmaceutical manufacturing.
  • Accurate PMI target setting is challenging and crucial for sustainable practices.
  • Existing machine learning tools show potential but require further development for broader application.

Purpose of the Study:

  • To refine and expand the SMART-PMI tool into an open-source model and application.
  • To enhance the prediction of molecular complexity for setting PMI targets.
  • To promote explainability and informed decision-making in pharmaceutical process development.

Main Methods:

  • Developed an open-source machine learning model based on four molecular descriptors: heteroatom count, stereocenter count, unique topological torsion, and connectivity index chi4n.
  • Correlated molecular features to molecular complexity to predict PMI targets.
  • Created a user-friendly application accepting SDF files for rapid complexity quantification and PMI target generation.

Main Results:

  • The refined model achieved 82.6% predictive accuracy and a 0.349 RMSE for molecular complexity.
  • The developed application provides accessible PMI targets to guide process development.
  • The model emphasizes explainability and parsimony for better understanding and decision-making.

Conclusions:

  • The open-source SMART-PMI tool offers a flexible and explainable approach to optimizing pharmaceutical manufacturing processes.
  • This advancement supports the adoption of green chemistry principles and sustainable practices.
  • The integrated tools facilitate data-driven process development for improved resource efficiency.