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Related Experiment Video

Updated: Jun 21, 2025

Generation of Dispersed Presomitic Mesoderm Cell Cultures for Imaging of the Zebrafish Segmentation Clock in Single Cells
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Substrate Rigidity Modulates Segmentation Clock Dynamics in Isolated Presomitic Mesoderm Cells.

Chun-Yen Sung1, Usha Kadiyala1, Owen Blanchard1

  • 1Department of Biophysics, University of Michigan, Ann Arbor, MI 48109.

Biorxiv : the Preprint Server for Biology
|July 15, 2024
PubMed
Summary
This summary is machine-generated.

Mechanical cues regulate the segmentation clock (a genetic oscillator in the presomitic mesoderm) by influencing cell oscillations. Stiffer substrates reduce oscillating cells and cycles, impacting somitogenesis.

Keywords:
Segmentation clockoscillatorpresomitic mesodermsomitogenesissurface rigidity

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Generation of Dispersed Presomitic Mesoderm Cell Cultures for Imaging of the Zebrafish Segmentation Clock in Single Cells
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A Microfluidics Approach for the Functional Investigation of Signaling Oscillations Governing Somitogenesis
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Area of Science:

  • Developmental Biology
  • Mechanobiology
  • Cellular Oscillations

Background:

  • The segmentation clock, a genetic oscillator in the presomitic mesoderm (PSM), is crucial for embryonic development.
  • While biochemical signals are known regulators, the role of mechanical cues in segmentation clock function is poorly understood.
  • The intricate PSM microenvironment complicates isolating mechanical effects on clock oscillations.

Purpose of the Study:

  • To investigate the impact of mechanical stimuli on segmentation clock oscillations.
  • To determine how substrate rigidity influences the behavior of PSM cells and their clock.
  • To elucidate the role of cell-substrate interactions in somitogenesis.

Main Methods:

  • Zebrafish PSM cells were cultured on polydimethylsiloxane (PDMS) micropost arrays with varying rigidities (0.6–1200 kPa).
  • Oscillations, cell percentage, cycle counts, and periods were quantified.
  • Cellular biophysical properties including motility, contractility, and circularity were analyzed.

Main Results:

  • An inverse sigmoidal relationship was observed between substrate rigidity and the percentage of oscillating cells and oscillation cycles.
  • A switching threshold for oscillation was identified between 3–6 kPa rigidity.
  • Cellular properties such as motility, contractility, and circularity were altered by substrate rigidity.

Conclusions:

  • Cell-substrate interactions play a critical role in regulating segmentation clock behavior.
  • Mechanical cues significantly influence the oscillatory dynamics of the segmentation clock.
  • These findings provide insights into the mechanobiology of somitogenesis and embryonic patterning.