Interaction between microRNA-195 and HuR regulates Paneth cell function in the intestinal epithelium by altering SOX9

Min S Kwon1, Hee K Chung1, Lan Xiao1,2

  • 1Cell Biology Group, Department of Surgery, University of Maryland School of Medicine, Baltimore, Maryland, United States.

Insights

MicroRNA-195 (miR-195) represses Paneth cell function by inhibiting SOX9 translation through interaction with HuR. This discovery sheds light on the regulation of Paneth cell activity in the small intestine.

Area of Science:

  • Molecular Biology
  • Gastroenterology
  • Cell Biology

Background:

  • Paneth cells in the small intestine are crucial for pathogen clearance and maintaining the stem cell niche.
  • Paneth cell dysfunction is implicated in various diseases, but the regulatory mechanisms are poorly understood.
  • MicroRNAs (miRNAs) are known regulators of gene expression, but their specific roles in Paneth cell function require further investigation.

Purpose of the Study:

  • To identify novel regulators of Paneth cell development and function.
  • To elucidate the molecular mechanism by which microRNA-195 (miR-195) influences Paneth cell activity.
  • To investigate the role of SOX9 translation and its interaction with HuR in miR-195-mediated regulation.

Main Methods:

  • Generation of tissue-specific transgenic mice expressing miR-195 in the intestinal epithelium.
  • Analysis of Paneth cell numbers and SOX9 expression in wild-type and transgenic mice.
  • In vitro studies using intestinal organoids to assess the effects of SOX9 and miR-195 on Paneth cell development.
  • RNA immunoprecipitation and Western blotting to study the interaction between miR-195, HuR, and SOX9 mRNA.

Main Results:

  • Transgenic expression of miR-195 in mice led to decreased SOX9 levels and reduced Paneth cell numbers.
  • Ectopic SOX9 expression restored Paneth cell development in miR-195-expressing organoids.
  • miR-195 inhibited SOX9 translation by preventing HuR binding to SOX9 mRNA, without directly binding to the mRNA itself.
  • Inhibition of miR-195 activity improved Paneth cell function in HuR-deficient organoids.

Conclusions:

  • MicroRNA-195 acts as a repressor of Paneth cell development and function in the small intestinal epithelium.
  • The regulatory mechanism involves the interaction of miR-195 with HuR, leading to altered SOX9 translation.
  • These findings reveal a novel pathway controlling Paneth cell activity, with potential implications for intestinal diseases.

Related Concept Videos

MicroRNAs01:22

MicroRNAs

MicroRNA (miRNA) are short, regulatory RNA transcribed from introns—non-coding regions of a gene—or intergenic regions—stretches of DNA present between genes. Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After...
21.2K
Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
879
Regulation of Expression Occurs at Multiple Steps02:24

Regulation of Expression Occurs at Multiple Steps

Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
22.6K
Master Transcription Regulators02:23

Master Transcription Regulators

Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a  complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
6.9K
Experimental RNAi02:15

Experimental RNAi

RNA interference (RNAi) is a cellular mechanism that inhibits gene expression by suppressing its transcription or activating the RNA degradation process. The mechanism was discovered by Andrew Fire and Craig Mello in 1998 in plants. Today, it is observed in almost all eukaryotes, including protozoa, flies, nematodes, insects, parasites, and mammals. This precise cellular mechanism of gene silencing has been developed into a technique that provides an efficient way to identify and determine the...
6.1K
Chromatin Structure Regulates pre-mRNA Processing02:41

Chromatin Structure Regulates pre-mRNA Processing

In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
7.0K