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DNA probes are fragments of DNA labeled with a reporter tag to enable their detection or purification. The resulting labeled DNA probes can then hybridize to target nucleic acid sequences through complementary base-pairing, and may be used to recover or identify these regions.
Radioisotopes, fluorophores, or small molecule binding partners like biotin or digoxigenin, are the most widely used reporter tags for labeling DNA probes. These labels can be attached to the probe DNA molecule via...
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A Ratiometric Fluorescence Detection Method for Berberine Using Triplex-Containing DNA-Templated Silver Nanoclusters.

Ming Zhu1, Mingyang Sun1, Juntong Liu1

  • 1School of Pharmacy, Changchun University of Chinese Medicine, 1035 Boshuo Road, Changchun 130117, China.

Molecules (Basel, Switzerland)
|August 10, 2024
PubMed
Summary

A new fluorescent method accurately detects berberine (BBR) using DNA-templated silver nanoclusters. This sensitive technique quantifies BBR in real samples, aiding pharmacological research and clinical use.

Keywords:
DNA-AgNCsberberineratiometric fluorescencetriplex

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Area of Science:

  • Analytical Chemistry
  • Biochemistry
  • Nanotechnology

Background:

  • Berberine (BBR), a natural isoquinoline alkaloid, possesses diverse pharmacological activities and is used in disease treatment.
  • Accurate quantification of BBR is crucial for pharmacological research and clinical applications.

Purpose of the Study:

  • To develop a sensitive and selective fluorescent detection method for Berberine (BBR).
  • To utilize the specific interaction between BBR and triplex DNA for quantitative analysis.

Main Methods:

  • A fluorescent detection method was established using DNA-templated silver nanoclusters (DNA-AgNCs).
  • The method leverages the fluorescence quenching of DNA-AgNCs upon binding with BBR to form a BBR-triplex complex.
  • Ratiometric fluorescence signals were measured to correlate with BBR concentration.

Main Results:

  • The method demonstrated a linear relationship between the ratiometric fluorescence signal and BBR concentration from 10 nM to 1000 nM.
  • A low detection limit of 10 nM was achieved.
  • The developed method showed excellent sensitivity and selectivity for BBR detection.

Conclusions:

  • A novel, sensitive, and selective fluorescent method for Berberine (BBR) detection was successfully developed.
  • The method, based on DNA-AgNCs and BBR-triplex interaction, is suitable for quantifying BBR in real samples.
  • This technique offers a valuable tool for pharmacological studies and clinical applications of Berberine.