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Engineering Artificial Factors to Specifically Manipulate Alternative Splicing in Human Cells
Published on: April 26, 2017
Beyond ribosomal function: RPS6 deficiency suppresses cholangiocarcinoma cell growth by disrupting alternative
Wenkang Fu1, Yanyan Lin2, Mingzhen Bai1
1The First School of Clinical Medicne, Lanzhou University, Lanzhou 730030, China.
Abstract:
Cholangiocarcinoma (CCA) is a bile duct malignancy with a dismal prognosis. This study systematically investigated the role of the ribosomal protein S6 (RPS6) gene, which is dependent in CCA. We found that RPS6 upregulation in CCA tissues was correlated with a poor prognosis. Functional investigations have shown that alterations in RPS6 expression, both gain- and loss-of function could affect the proliferation of CCA cells. In xenograft tumor models, RPS6 overexpression enhances tumorigenicity, whereas RPS6 silencing reduces it. Integration analysis using RNA-seq and proteomics elucidated downstream signaling pathways of RPS6 depletion by affecting the cell cycle, especially DNA replication. Immunoprecipitation followed by mass spectrometry has identified numerous spliceosome complex proteins associated with RPS6. Transcriptomic profiling revealed that RPS6 affects numerous alternative splicing (AS) events, and combined with RNA immunoprecipitation sequencing, revealed that minichromosome maintenance complex component 7 (MCM7) binds to RPS6, which regulates its AS and increases oncogenic activity in CCA. Targeting RPS6 with vivo phosphorodiamidate morpholino oligomer (V-PMO) significantly inhibited the growth of CCA cells, patient-derived organoids, and subcutaneous xenograft tumor. Taken together, the data demonstrate that RPS6 is an oncogenic regulator in CCA and that RPS6-V-PMO could be repositioned as a promising strategy for treating CCA.
Insights
Ribosomal protein S6 (RPS6) is upregulated in cholangiocarcinoma (CCA), promoting cancer growth and poor prognosis. Targeting RPS6 with V-PMO effectively inhibited CCA progression, offering a potential new treatment strategy.
Area of Science:
- Oncology
- Molecular Biology
- Cancer Genetics
Background:
- Cholangiocarcinoma (CCA) is a highly aggressive bile duct cancer with limited treatment options and poor patient outcomes.
- The molecular mechanisms driving CCA progression remain incompletely understood, necessitating the identification of novel therapeutic targets.
Purpose of the Study:
- To investigate the functional role of ribosomal protein S6 (RPS6) in cholangiocarcinoma (CCA) pathogenesis.
- To explore RPS6 as a potential therapeutic target for CCA treatment.
Main Methods:
- Correlation analysis of RPS6 expression with clinical outcomes in CCA patient tissues.
- In vitro functional assays (proliferation, gain/loss-of-function) and in vivo xenograft models to assess RPS6's impact on tumorigenicity.
- RNA sequencing, proteomics, immunoprecipitation-mass spectrometry, and RNA immunoprecipitation sequencing to elucidate RPS6 downstream pathways and interactions.
- In vivo efficacy studies using a phosphorodiamidate morpholino oligomer (V-PMO) targeting RPS6.
Main Results:
- RPS6 upregulation in CCA tissues significantly correlates with poor prognosis.
- RPS6 modulates CCA cell proliferation and enhances tumorigenicity in vivo.
- RPS6 influences cell cycle progression, DNA replication, and alternative splicing, notably interacting with MCM7.
- RPS6-V-PMO treatment demonstrated significant inhibition of CCA growth in vitro and in vivo.
Conclusions:
- RPS6 acts as an oncogenic driver in cholangiocarcinoma, influencing key cellular processes including proliferation and splicing.
- Targeting RPS6 with V-PMO represents a promising therapeutic strategy for cholangiocarcinoma, warranting further clinical investigation.
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