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Detection of Genes Related to Antibiotic Resistance in Leptospira
Santiago Pineda1, Juliana María Martínez Garro1, Jorge Emilio Salazar Flórez2
1CES Biology, Science and Biotechnology School, CES University, Medellin 050021, Colombia.
Abstract:
Leptospirosis is a disease caused by the bacteria of the Leptospira genus, which can usually be acquired by humans through contact with urine from infected animals; it is also possible for this urine to contaminate soils and bodies of water. The disease can have deadly consequences in some extreme cases. Fortunately, until now, patients with leptospirosis have responded adequately to treatment with doxycycline and azithromycin, and no cases of antibiotic resistance have been reported. However, with the extensive use of such medications, more bacteria, such as Staphylococci and Enterococci, are becoming resistant. The purpose of this study is to determine the presence of genes related to antibiotic resistance in the Leptospira genus using bioinformatic tools, which have not been undertaken in the past. Whole genomes from the 69 described Leptospira species were downloaded from NCBI's GeneBank and analyzed using CARD (The Comprehensive Antibiotic Resistant Database) and RAST (Rapid Annotations using Subsystem Technology). After a detailed genomic search, 12 genes associated with four mechanisms were found: resistance to beta-lactamases, vancomycin, aminoglycoside adenylyltransferases, as well as multiple drug efflux pumps. Some of these genes are highly polymorphic among different species, and some of them are present in multiple copies in the same species. In conclusion, this study provides evidence of the presence of genes related to antibiotic resistance in the genomes of some species of the genus Leptospira, and it is the starting point for future experimental evaluation to determine whether these genes are transcriptionally active in some species and serovars.
Insights
Antibiotic resistance genes were identified in Leptospira bacteria using bioinformatics. This study reveals potential resistance mechanisms in Leptospira, prompting further research into their activity and clinical implications.
Area of Science:
- Microbiology
- Bioinformatics
- Genomics
Background:
- Leptospirosis is a zoonotic disease caused by Leptospira bacteria.
- Current treatments for leptospirosis are effective, with no reported antibiotic resistance.
- Rising antibiotic resistance in other bacteria necessitates investigation into Leptospira.
Purpose of the Study:
- To identify antibiotic resistance genes within the Leptospira genus using bioinformatics.
- To establish a baseline for understanding potential resistance mechanisms in Leptospira.
Main Methods:
- Downloaded and analyzed whole genomes of 69 Leptospira species from NCBI GeneBank.
- Utilized The Comprehensive Antibiotic Resistant Database (CARD) and Rapid Annotations using Subsystem Technology (RAST) for analysis.
Main Results:
- Identified 12 genes associated with four resistance mechanisms: beta-lactamases, vancomycin, aminoglycoside adenylyltransferases, and multidrug efflux pumps.
- Observed high polymorphism and multiple gene copies in some identified resistance genes across different Leptospira species.
Conclusions:
- This study provides the first evidence of antibiotic resistance genes in Leptospira genomes.
- Findings serve as a foundation for future experimental studies to assess the transcriptional activity of these genes.
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