iPhyDSDB: Phytoplasma Disease and Symptom Database
Wei Wei1, Jonathan Shao2, Yan Zhao1
1Molecular Plant Pathology Laboratory, Beltsville Agricultural Research Center, Agricultural Research Service, United States Department of Agriculture, Beltsville, MD 20705, USA.
A new Phytoplasma Disease Symptom Database (iPhyDSDB) aids farmers and researchers in identifying plant diseases caused by phytoplasmas. This resource enhances early detection and management of these significant agricultural threats.
Area of Science:
- Plant Pathology
- Bacteriology
- Bioinformatics
Background:
- Phytoplasmas are intracellular bacteria causing significant economic losses in agriculture.
- Early and rapid diagnosis of phytoplasma infections is critical for disease management.
- Symptom recognition by farmers is key for early detection.
Purpose of the Study:
- To develop a comprehensive Phytoplasma Disease Symptom Database (iPhyDSDB).
- To create a web-based interface for easy access to phytoplasma infection information.
- To aid farmers, growers, and researchers in diagnosing phytoplasma-related plant diseases.
Main Methods:
- Retrieved ~35,000 phytoplasma sequence entries from NCBI.
- Gathered information on 945 plant species associated with phytoplasma infections.
- Manually curated links to symptomatic images and developed a web interface using MySQL and PHP.
Main Results:
- Established the Phytoplasma Disease Symptom Database (iPhyDSDB).
- Included curated links to symptomatic images and descriptive symptom definitions.
- Implemented advanced search functionality based on plant host and symptom type.
Conclusions:
- iPhyDSDB provides a valuable resource for identifying and diagnosing phytoplasma infections.
- The database enhances understanding and management of phytoplasma diseases.
- Facilitates efficient information retrieval for various agricultural stakeholders.
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