Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Diffusion01:12

Diffusion

Diffusion is the passive movement of substances down their concentration gradients—requiring no expenditure of cellular energy. Substances, such as molecules or ions, diffuse from an area of high concentration to an area of low concentration in the cytosol or across membranes. Eventually, the concentration will even out, with the substance moving randomly but causing no net change in concentration. Such a state is called dynamic equilibrium, which is essential for maintaining overall...
Assessment of Diffusion and Perfusion01:17

Assessment of Diffusion and Perfusion

Understanding and evaluating diffusion and perfusion is critical in assessing a patient's respiratory and circulatory health. These processes play key roles in maintaining the body's internal environment, ensuring that tissues receive adequate oxygen while waste products are efficiently removed.
The Role of Diffusion in Respiration
Diffusion is the process by which molecules move from an area of higher concentration to an area of lower concentration. In the respiratory system, this principle...
Magnetic Resonance Imaging01:24

Magnetic Resonance Imaging

Magnetic resonance imaging (MRI) is a noninvasive medical imaging technique based on a phenomenon of nuclear physics discovered in the 1930s, in which matter exposed to magnetic fields and radio waves was found to emit radio signals. In 1970, a physician and researcher named Raymond Damadian noticed that malignant (cancerous) tissue gave off different signals than normal body tissue. He applied for a patent for the first MRI scanning device in clinical use by the early 1980s. The early MRI...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same author

Implicit neural representations for accurate estimation of the Standard Model of white matter.

Communications biology·2025
Same author

A subject-specific reversible folding model reveals geometry-driven white-matter organization.

bioRxiv : the preprint server for biology·2025
Same author

Image-Based Identification and Localisation of Changes in Intraoperative Brain Tumour Resection.

Journal of imaging informatics in medicine·2025
Same author

Microstructural Characterization of Short Association Fibers Related to Long-Range White Matter Tracts in Normative Development.

Human brain mapping·2025
Same author

MRI signatures of cortical microstructure in human development align with oligodendrocyte cell-type expression.

Nature communications·2025
Same author

Implicit neural representation of multi-shell constrained spherical deconvolution for continuous modeling of diffusion MRI.

Imaging neuroscience (Cambridge, Mass.)·2025
Same journal

Reproducibility of Splanchnic Blood Flow Measured Using Phase-Contrast MRI.

NMR in biomedicine·2026
Same journal

Restriction-Weighted Q-Space Trajectory Imaging (ResQ): Toward Mapping Diffusion-Time Effects With Tensor-Valued Diffusion Encoding in Human Prostate Cancer Xenografts.

NMR in biomedicine·2026
Same journal

In Vivo Quantitative Detection of PEGylated Macromolecules by Magnetic Resonance Spectroscopy.

NMR in biomedicine·2026
Same journal

Metabolic Assessment in Human Pluripotent Stem Cell-Derived Cerebral Organoids Using HR-MAS NMR Spectroscopy.

NMR in biomedicine·2026
Same journal

Characterizing Metabolic and Compositional Heterogeneity of Calf Muscle Using CEST MRI at 3 T.

NMR in biomedicine·2026
Same journal

Estimating the Sodium Content: A Case Series of Benign and Malignant Renal Tumours Using <sup>23</sup>Na-MRI at 3 T.

NMR in biomedicine·2026
See all related articles

Related Experiment Video

Updated: Jun 16, 2026

Role of Diffusion MRI Tractography in Endoscopic Endonasal Skull Base Surgery
09:53

Role of Diffusion MRI Tractography in Endoscopic Endonasal Skull Base Surgery

Published on: July 5, 2021

3.6K

A taxonomic guide to diffusion MRI tractography visualization tools.

Miriam Laamoumi1,2, Tom Hendriks1, Maxime Chamberland1

  • 1Department of Mathematics and Computer Science, Eindhoven University of Technology, Eindhoven, The Netherlands.

NMR in Biomedicine
|October 8, 2024
PubMed
Summary
This summary is machine-generated.

This survey reviews 27 diffusion MRI tractography tools, highlighting visualization features. It aims to help researchers and clinicians navigate neuroimaging software options.

Keywords:
diffusion MRItaxonomytractographyvisualization

More Related Videos

Measuring Connectivity in the Primary Visual Pathway in Human Albinism Using Diffusion Tensor Imaging and Tractography
13:26

Measuring Connectivity in the Primary Visual Pathway in Human Albinism Using Diffusion Tensor Imaging and Tractography

Published on: August 11, 2016

12.2K
DTI of the Visual Pathway - White Matter Tracts and Cerebral Lesions
10:05

DTI of the Visual Pathway - White Matter Tracts and Cerebral Lesions

Published on: August 26, 2014

14.0K

Related Experiment Videos

Last Updated: Jun 16, 2026

Role of Diffusion MRI Tractography in Endoscopic Endonasal Skull Base Surgery
09:53

Role of Diffusion MRI Tractography in Endoscopic Endonasal Skull Base Surgery

Published on: July 5, 2021

3.6K
Measuring Connectivity in the Primary Visual Pathway in Human Albinism Using Diffusion Tensor Imaging and Tractography
13:26

Measuring Connectivity in the Primary Visual Pathway in Human Albinism Using Diffusion Tensor Imaging and Tractography

Published on: August 11, 2016

12.2K
DTI of the Visual Pathway - White Matter Tracts and Cerebral Lesions
10:05

DTI of the Visual Pathway - White Matter Tracts and Cerebral Lesions

Published on: August 26, 2014

14.0K

Area of Science:

  • Neuroimaging
  • Medical Visualization
  • Computational Neuroscience

Background:

  • Diffusion MRI tractography is crucial for neuroimaging research and clinical applications.
  • The growing number of tractography tools complicates selection and usage for new researchers and clinicians.

Purpose of the Study:

  • To systematically explore and categorize visualization features across 27 diffusion MRI tractography tools.
  • To provide a comprehensive overview and taxonomy of existing tractography visualization software.

Main Methods:

  • A systematic survey of 27 research tools for diffusion MRI tractography.
  • Analysis of main purpose, visualization techniques, and interactive features of each tool.

Main Results:

  • A structured taxonomy of tractography visualization tools based on their features.
  • Identification of prevalent and absent visualization and interactive techniques across the surveyed tools.

Conclusions:

  • The findings offer insights to aid researchers, clinicians, and developers in understanding the tractography visualization tool landscape.
  • Helps identify knowledge gaps and facilitates informed tool selection for neuroimaging data analysis.