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Related Concept Videos

Lytic Cycle of Bacteriophages01:30

Lytic Cycle of Bacteriophages

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Bacteriophages, also known as phages, are specialized viruses that infect bacteria. A key characteristic of phages is their distinctive “head-tail” morphology. A phage begins the infection process (i.e., lytic cycle) by attaching to the outside of a bacterial cell. Attachment is accomplished via proteins in the phage tail that bind to specific receptor proteins on the outer surface of the bacterium. The tail injects the phage’s DNA genome into the bacterial cytoplasm. In the...
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In contrast to the lytic cycle, phages infecting bacteria via the lysogenic cycle do not immediately kill their host cell. Instead, they combine their genome with the host genome, allowing the bacteria to replicate the phage DNA along with the bacterial genome. The incorporated copy of the phage genome is called the prophage. Some prophages can re-activate and enter the lytic cycle. This often occurs in response to a perturbation, such as DNA damage, but can also transpire in the absence of...
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Bacteriophages, or phages, are viruses that specifically infect bacteria. Among them, T-even bacteriophages, such as T4, exhibit a well-characterized lytic replication cycle in Escherichia coli (E. coli). This process ensures the rapid proliferation of the virus while ultimately leading to the destruction of the bacterial host.Attachment and DNA InjectionThe infection process begins with the recognition and binding of the T4 phage to the E. coli cell surface. Tail fibers of the phage...
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Synthesis of Infectious Bacteriophages in an E. coli-based Cell-free Expression System
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A cell-free bacteriophage synthesis system for directed evolution.

Bo Xu1, Li-Hua Liu2, Houliang Lin2

  • 1School of Basic Medical Sciences, Hubei University of Science and Technology, Xianning 437100, PR China.

Trends in Biotechnology
|October 27, 2024
PubMed
Summary
This summary is machine-generated.

Researchers developed a faster cell-free M13 phage synthesis system. This system enabled directed evolution of T7 RNA polymerase (RNAP) and suppressor tRNA, improving gene expression and stop codon readthrough.

Keywords:
M13 phagecell-free synthesisdirected evolutiondropletsgenome simplification

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Area of Science:

  • Biotechnology
  • Molecular Biology
  • Synthetic Biology

Background:

  • Efficient phage production is crucial for drug discovery, disease treatment, and gene evolution.
  • Traditional in vivo methods for phage production are time-consuming and less efficient.

Purpose of the Study:

  • To develop a robust and efficient cell-free synthesis system for M13 phage production.
  • To establish a cell-free directed evolution system for protein and nucleic acid engineering.
  • To improve the efficiency of gene expression and stop codon readthrough.

Main Methods:

  • Simplified M13 phage genome construction for cell-free synthesis.
  • Development of a droplet-based cell-free directed evolution system.
  • Coupling the system with fluorescence-activated droplet sorting (FADS).
  • Evolution of T7 RNA polymerase (RNAP) and tryptophan tRNA.

Main Results:

  • Achieved three-times faster M13 phage production compared to traditional in vivo methods.
  • Successfully evolved T7 RNAP with twofold higher activity for terminator readthrough.
  • Evolved tryptophan tRNA into a suppressor tRNA with eightfold increased activity for UAG stop codon readthrough.

Conclusions:

  • The developed cell-free system offers a significantly more efficient approach for M13 phage production.
  • This platform enables rapid directed evolution of key biological components like RNAP and tRNA.
  • The enhanced components have potential applications in synthetic biology and biotechnology.