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The Rolled Towel Method for Hormone Response Assays in Maize
Clarice F Gonzales1, Craig L Cowling1, Dior R Kelley2
1Department of Genetics, Development, and Cell Biology, Iowa State University, Ames, Iowa 50011, USA.
Cold Spring Harbor Protocols
|October 30, 2024
Summary
The updated rolled towel assay (RTA) offers a soil-free method for phenotyping maize seedling responses to various chemicals, aiding in genetic screens and trait analysis.
Area of Science:
- Plant Science
- Genetics
- Agricultural Science
Background:
- The rolled towel assay (RTA) is a soil-free method for evaluating juvenile crop phenotypes.
- Existing protocols require updates for modern phenotyping needs in crops like maize and soybean.
Purpose of the Study:
- To provide an updated, scalable RTA protocol for phenotyping maize seedling responses to chemical treatments.
- To detail methods for root trait annotation and primary root length data analysis.
Main Methods:
- Utilized an updated rolled towel assay (RTA) protocol for maize seedlings.
- Tested the protocol with synthetic auxin herbicides, an auxin precursor, and an auxin inhibitor.
- Included detailed instructions for root trait annotation and data analysis.
Main Results:
- The protocol successfully phenotyped maize seedling responses to tested chemicals.
- Demonstrated the RTA's versatility for various plant growth regulators soluble in growth media.
- Provided a framework for root trait analysis and data interpretation.
Conclusions:
- The updated RTA protocol is effective for maize seedling phenotyping and chemical response analysis.
- This method is scalable for genetic screens, gene expression studies, GWASs, and QTL identification.
- The protocol facilitates robust analysis of root traits in response to chemical stimuli.
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